Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00488 ATGGGATTCCCTTTCATTGGAGAAATGATTAGTCTTCTTTGGTATTTCAAAATTGTTCGACGCCCAGATGATTTCATTAATGCTAAGAGACGCAAATATGGAGATGGAGAAGGCATGTTTAGAACACACCTTTTTGGGAAGCCATCTATCATAGTATACGCTCCAGCTATTCACAAATTTGTGTTATTTTCAGACAGCAATTTCAAACAAGATTGGCCCACTGTTGAGGTTATGGGCCGAACTTCAATGGTGGCTGTCCATGGAAAGGCCCATACACGGGTTCGCAACTTTGTCATAAATGCCATCAATCGTCCTGATGCCCTAACCCGCATCGCAGCTCTTGTCCAACCTAACATAGTCGTTTCGCTTCGATCTTGGGCAGAAATAGGTAAAATCAAAGCCAAATTTGAAACCCAAAAGCTGATACTTGAGAATATTGGGAAATTATTCTTGGGCAAGGAGTCAGGTCCTTTTATAAATTCATTGCATAAGCTTTATCAAGCCTTGCTTTTAGGAGTGAGAGCTTATCCAATTAACATTCCTGGTTTTGCATACCACCATGCTCTTCAGTGTAGAAGAAAGCTTGAGGACATTTTTTGGATGGAGTTAAGTAATAGAAAGAGTGAAAATAAGGGGGAAACAATAGATCTAATGGATGGGTTGATACAAATTGAAGATGGTGAAGAAGTGATAAGAGTAGCCAAAGTTTCGGCTTTTCTTTTGAGAAAAGTTGTAAATGAAGTTGATTATAAAGGCTATAAGATACCAAAAGTATGGAATGTAATTCTCTTCCTTCGCTATCTTCACACCAACCCAGAGAAATTTAACGATCCAATGTACTTCAATCTTGATAGATGGAATGTATGTATCGTGACTCTTCCTTAA 885 0.3864 MGFPFIGEMISLLWYFKIVRRPDDFINAKRRKYGDGEGMFRTHLFGKPSIIVYAPAIHKFVLFSDSNFKQDWPTVEVMGRTSMVAVHGKAHTRVRNFVINAINRPDALTRIAALVQPNIVVSLRSWAEIGKIKAKFETQKLILENIGKLFLGKESGPFINSLHKLYQALLLGVRAYPINIPGFAYHHALQCRRKLEDIFWMELSNRKSENKGETIDLMDGLIQIEDGEEVIRVAKVSAFLLRKVVNEVDYKGYKIPKVWNVILFLRYLHTNPEKFNDPMYFNLDRWNVCIVTLP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00488 294 Gene3D Cytochrome P450 1 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00488 294 Gene3D Cytochrome P450 229 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00488 294 Pfam Cytochrome P450 11 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00488 294 Pfam Cytochrome P450 228 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00488 294 SUPERFAMILY Cytochrome P450 3 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00488 294 PANTHER CYTOCHROME P450 26 228 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00488 Trre-Chr6 3577318 3580342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00488 201 287 Cytochrome P450 AT1G05160 35.556 1.73e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00488 - - tpra:123916160 373.244