Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00451 ATGGTATGCATAAGAAAAGCCAACGTTAACGACCTACTCGCGATGCAAGCGTGTAACCTTTTCTGTTTACCGGAGAATTACCAGATGAAGTATTATCTTTATCATATCCTCTCGTGGCCTCAGCTTCTTTACGTCGCCGAAGATTACAACGGCCGTATCGTCGGTTACGTTCTCGCTAAGATGGAAGAGGAAACGAATGAGTGTCATGGTCATATTACTTCTCTTGCTGTTCTTCGTACTCATAGGAAGCTTGGTATTGCTACTAAGCTTATGACGGCTGCACAGAATGCTATGGAACAGGTGTTTGGTGCCGAGTATGTGTCGCTGCACGTCAGGAAGAGCAACCGTGCAGCTTTTAATTTGTACACAGAGACCTTGGGGTACAAGATTCATGATGTGGAGGCCAAGTATTATGCTGATGGGGAGGATGCTTATGACATGAGGAAGCAACTCAAAGGGAAACAGTTGCATCCACCGCAGCATCACCACCACCACCACCATCATGGTGGTGGTTGTTGTTCTGGGGAGACCAAGGGGAATGCAAAAGCCACCTGA 555 0.4703 MVCIRKANVNDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETNECHGHITSLAVLRTHRKLGIATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQLHPPQHHHHHHHHGGGCCSGETKGNAKAT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00451 184 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Trre6g00451 184 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Trre6g00451 184 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 176 IPR045047 GO:0004596|GO:0006474|GO:0031415
Trre6g00451 184 CDD NAT_SF 43 110 - -
Trre6g00451 184 MobiDBLite consensus disorder prediction 154 169 - -
Trre6g00451 184 MobiDBLite consensus disorder prediction 152 184 - -
Trre6g00451 184 Gene3D - 2 175 - -
Trre6g00451 184 FunFam N-alpha-acetyltransferase daf-31-like 2 172 - -
Trre6g00451 184 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00451 Trre-Chr6 3265377 3268918 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre6g00451 Acetyltransf_1 1.5e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00451 K20791 - gmx:100810038 335.495