Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00380 ATGGCAGAAGCAGTGATTGGTGGAGCTTTCCTCTCAGCTTTCCTTGATGTTATCTTCAAAAGGCTGACATCACCTGAAGTTGCCAACTTGATCCATGGAAACAAGCTTGACAAGAAATTACTTCAGAGGCTGGAGACAACTCTGAAAGTGGTTAGAACTGTGCTTAATGATGCTGAGAAGAAACAAATCAGGGATTCTTATGTCAACAACTGGCTCAATGATCTCAAAGATGCTGTCTATGTTGCTGATGACTTATTGGATGAAGTTTCAACCAAAACTGTGACTCAAAAAGAGGTAACCAATCCGTTTTTTCGCCTTTTCAACTTGCAAGATAGGGAGATGGTTAGTAAGTTTGAAGATATAGTCGAGAGACTAGAATCAATCTTGAAACTCAAAGAGAGTCTTGATCTCAAAGAGATCGCGGTGGAGAATATGTCATATAAAACTCCATCAACATCTCTCCAAGACGGATCTCGTGTATATGCAACGTTCCTTGGCGGAGAATTCTTCTTTAGATCAGAAGAACTTGCGAAAGAAACCAAGATTAACATCAAGGCTCGTCATTTGTCATTCACCAAATTCAATGGTCTAATCTCCGAAAACTTTGAAGTACTTGGTAGAGTAAAATTTCTGAGAACATTCTTACCAATCAATTTTGAAGTTGCTGCATTCAACAACGAAAAGGTGCCATGTAGTTGTTTATCCATATCAATGAAGACTCTTCATATAGAGGATTTTAGAAAACTAGAATTCACAAAACAGCACAATCACAAGTTACTAGAGTCATTGTCAATACACAACAGCTGTGATTCACTCACATCGCTCCCATTGGACATCTTCCCGAATCTCAAACGTCTCTACATCAGCAACTGTGAAAATCTTGAATCTCTTTTGGTGTCACAGTCACATGATTTCATTCTTCAAAACTTGACTTCTTTTGAGATCCGCGAATGTCCGAATTTGGTATCATTGTCAAGTCAAGGATTGCCTGCTCCCAACATGACTCGCTTTCTCATTTCCAAGTGCAAGAAGTTAAAGTCACTGCCTCATCAGATGAATATTCTTCTCCCAAAGTTAGAATATTTCCGACTAGAAAACTGTCCGGAAATCGGATCCTTTCCAGAAAGTGGTATGCCGCCTAAGTTGAGATCAATTCGTATCACGAATTGCACGAAACTACTTAGTGGCCCGTCCTGGCCATCCATGGACATGCTTACTGATGTCACAATCGAAGGTCCATGTGATGCGATCAAGTCTTTCCCAAAGGAAGGTTTGTTACATGCCTCTCTTAAGTCTCTAACCCTACTCACATTTTCTAGTTTGGAGAGGTTGGATTGTAAGGGCCTTCGCCATCTCACCTCCCTCCAACAGTTAAGAATAAACGATTGCCCGAAATTGGAGAACATGGTTGGAGTAGAAACACTGCCTGCCTCTATATTAAATCTTTGCATCATTGGATGTCCTTTGTTGAAAGAAAAGTGCCACATGAAACACCCTCAAATTTGGAACAAAATTTCACACATCAAGGACATCAGCGTTGATCATAAACGGATTTCATAA 1560 0.4013 MAEAVIGGAFLSAFLDVIFKRLTSPEVANLIHGNKLDKKLLQRLETTLKVVRTVLNDAEKKQIRDSYVNNWLNDLKDAVYVADDLLDEVSTKTVTQKEVTNPFFRLFNLQDREMVSKFEDIVERLESILKLKESLDLKEIAVENMSYKTPSTSLQDGSRVYATFLGGEFFFRSEELAKETKINIKARHLSFTKFNGLISENFEVLGRVKFLRTFLPINFEVAAFNNEKVPCSCLSISMKTLHIEDFRKLEFTKQHNHKLLESLSIHNSCDSLTSLPLDIFPNLKRLYISNCENLESLLVSQSHDFILQNLTSFEIRECPNLVSLSSQGLPAPNMTRFLISKCKKLKSLPHQMNILLPKLEYFRLENCPEIGSFPESGMPPKLRSIRITNCTKLLSGPSWPSMDMLTDVTIEGPCDAIKSFPKEGLLHASLKSLTLLTFSSLERLDCKGLRHLTSLQQLRINDCPKLENMVGVETLPASILNLCIIGCPLLKEKCHMKHPQIWNKISHIKDISVDHKRIS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00380 519 Gene3D Ribonuclease Inhibitor 183 377 IPR032675 -
Trre6g00380 519 Gene3D Ribonuclease Inhibitor 378 502 IPR032675 -
Trre6g00380 519 Pfam Rx N-terminal domain 10 98 IPR041118 -
Trre6g00380 519 SUPERFAMILY L domain-like 227 503 - -
Trre6g00380 519 PANTHER OS11G0677101 PROTEIN 308 467 - -
Trre6g00380 519 Coils Coil 41 61 - -
Trre6g00380 519 Gene3D - 21 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00380 Trre-Chr6 2639674 2643432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00380 359 483 WRKY Transcription Factor Family AT5G45050 32.394 6.01e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00380 - - gmx:121172707 339.347