Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00374 ATGGGCAGAGAAATTGTGAGGCAGGAGTCAACATTGGAGCCTGGAAGACGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAGACAAGGGAACTGATACAATTGAAGTCATAATCATCGACTTGCATAAAGACAGAAAAGTGAACTGGTGTGGAGATGCTTTTGGGCAGATGAAGAACTTGAGAATTCTTATAATTAGAAATGCACAATTTTCCATAGGTCCTCAAATTCTTCCAGATAGCTTGAGAGTGCTTGATTGGTGTGCATATCAATCGCCCTCTTTACCATCCGAGTTTAATCCCAAGAATCTTGCAGTACTGCATCTACCTGAAAGTCGCCTTGAATGTTTTGAATCAGTCAAGGTGTTTCAGACACTGAGCTTTCTGAATTTTGAAGGCTGCAAGTTCCTAATTGAAGTACCTAGTTTATCTAGTGCACCAAATTTGGGGGCATTATGTCTTGATGACTGCACCAATTTAATTAGAATCCATGATTCAGTTGGGTTTCTTGACAAACTTGTTTCATTAAGTGCTCAAGATTGCACCCAACTAGAAAGTTTGGTTCCTTCCATCAATTTGCCATCTTTAGTTACTTTAGATCTAAGTGGTTGCTCATGTCTTGAGAGGTTCCCAGAAGTAGTAGGAGTGATGGAGAATATAAAAGATGTTTATTTAGACCACACTCGCATAGAACAATTGCCTTGTACAATTGGAAATCTTGTTGGGCTCCAACGTTTGTTCTTGAGGGGATGCCAAATGATGGTTCAGCTACCAAACTACATATTACCTAAAGTTGAGATAATAACAGCTTATGACGGTAGGGGATTTCAATCATCTGAAAATGAAGAAAAAGTGAATCCAAAAGTGTTTGCAAATGCCATGTGTGTTTATAATGAATATGGGAAGACCTTGCTTAATGTGTATTCTAGTAACAATTGCTCCAACGATGTCATAGAAGTATGTAGTCCTTTGGAAAATGACGGTGGAAAAAATCTTGTGATTGATGAATTTGAAACAACTCTTTTTAGGTACAGAGAGGGGAGAATAAAACTGGGTAAGCTTAGAAGGAATGAATCATCAATGTGTTTTTGGTTCCAAAAGAAATTCCCCAAGGTAGCTCTATGGTTTTTTGCAGAATCCGAGAGAAATAAATCCGGAAAGGATTTCAAGTTGAAAGTACTCATCAATGGCACTACTCAACTCACTTCTTCATGCGAATACATATTTTATTCACAAAAAGAGACTGAACATATGCTTTGTTGTGATCTACAATCCAATGTGGAGGGTGTTTTTTCAGAGAATGAGTGGAACTGGGTGGAGATTTTATGTGAGATGGAACATCTAATTCCCTATGATTCTGAAAGGGTCATGGCCCGCCAGGATTGGACCACTAAGACGATTCTAAAGTGGTCTCTCCTATATGTGTACCCAGAAAAAGAAGAGAATGATTTCAACTTATTTGACATTCTTGATTCTCCTTCTGTTTCAAAAAAACGAGATTATCTAGCTCTTCTATATGCAGTGGAAAATGCTGAAGTGATTCTAAAAGGGTCATGGCCCACCAAGATTAGACCACTAAGAAGCTGGGCAATGTCAGAAGCAGGAGCTGATGCAACCAAAGCGCAAGAAGATGAGGCGGCGCCAATTCTTGTCCCAGGGAAGAATTTTGAGACTGCTGCTGAGGAGGAAACTAAGGCTTAA 1713 0.3911 MGREIVRQESTLEPGRRSRLWFSDDIVHVLEEDKGTDTIEVIIIDLHKDRKVNWCGDAFGQMKNLRILIIRNAQFSIGPQILPDSLRVLDWCAYQSPSLPSEFNPKNLAVLHLPESRLECFESVKVFQTLSFLNFEGCKFLIEVPSLSSAPNLGALCLDDCTNLIRIHDSVGFLDKLVSLSAQDCTQLESLVPSINLPSLVTLDLSGCSCLERFPEVVGVMENIKDVYLDHTRIEQLPCTIGNLVGLQRLFLRGCQMMVQLPNYILPKVEIITAYDGRGFQSSENEEKVNPKVFANAMCVYNEYGKTLLNVYSSNNCSNDVIEVCSPLENDGGKNLVIDEFETTLFRYREGRIKLGKLRRNESSMCFWFQKKFPKVALWFFAESERNKSGKDFKLKVLINGTTQLTSSCEYIFYSQKETEHMLCCDLQSNVEGVFSENEWNWVEILCEMEHLIPYDSERVMARQDWTTKTILKWSLLYVYPEKEENDFNLFDILDSPSVSKKRDYLALLYAVENAEVILKGSWPTKIRPLRSWAMSEAGADATKAQEDEAAPILVPGKNFETAAEEETKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00374 570 Gene3D Ribonuclease Inhibitor 218 276 IPR032675 -
Trre6g00374 570 Gene3D Ribonuclease Inhibitor 44 217 IPR032675 -
Trre6g00374 570 SUPERFAMILY L domain-like 41 276 - -
Trre6g00374 570 Coils Coil 563 570 - -
Trre6g00374 570 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 276 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00374 Trre-Chr6 2606489 2609074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00374 2 265 WRKY Transcription Factor Family AT4G12020 37.367 4.55e-39 152