Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00373 ATGGGCAGAGAAACTGTGAGGCAGGAATCAATATTGGAGCCCGGAAGACGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAAACAAGGGAACTGATACAATTGAAGTCATAATCGTCGACTTGCATAAAGACAGAAAAAATCTTGCAATACTGAATCTGCCTGAAAGTCAACTTAAATGTTTCGAATCACTCAAGGTGTTTGAGATGTTGAGCTTTCTAGATTTAGAAGGGTGCAAGTTCCTAACCGAAGTGCCTAGTTTATCTAGAGTACCAAATTTGGGGGCACTGTGTCTTGATTACTGCACTAATTTAATCAGAATCCATGACTCGGTTGGGTTTCTTGAAAGGCTTGTGTTAATAAGTGCTCAAGGATGCACACAACTAGAACTTTTGGTTCCTTCCATCAACTTGCCATCTCTTGAGACTTTAGACCTTAGAGGTTGCTCACATCTAAAGAGCTTCCCAGAAGTAGTAGGAGTGATGGAGAATATAAAAGATGTTTATTTAGACCAGACTGCCTTAGAACAATTTCCTTTTACAATTGGAAATCTTGTTGGGCTCCAACGTTTTTTCTTGAGGGAATGCCAAAGGATGATTCAGCTACCAAGCTACATATTGCCTAAAGTTGAGATAATAACAACTTATGGTTGTAGGGGATTTCGATCAGCTGAAAATGAAGAAAAAGCGAGTCCAAAAGTGTTTGCAAATGCCATGTGTGTTAATAATGAATATGGAAAGTCCTTCCTTAATGTCTATGCTCGTAATATAAGCTCTAACGATGTCATAGAAGTATGCAGTCCTTTGTATAAGTCTGAACTCCGTAGTTTTATGCTTTCACAGGGCTGCATAAATGTGGGTATGCTTAGAAGGAATGAATCATCTGTGGTTTTTAGGTTCCGAAAAAAATTCCCCAGGATAGCTCTATCGTGTAAGGTAGAACCTGGAAAGCATTTTGACAACATGGTGTTGGATTTCAAGTTGAATGTTCTCATCAATGGCACCAAGCAACTCACTTCGTCATGTGAATACATATTCTATACAAAAGGAAAGACGGACCAATTGTTCCAATGTGATCTACAATGCAAAGTGGAGGGTATATTTTCAGAGAATGAGTGGAACTATGTGCAGATTTTATGTGAGATTGAACATCTCTTGCCATGTGATTCTAAAATGGCCATGGTCTACCGGTATTGGACCACTAAGAGTATTCTAAAGTGGTCTTTCATATACGCCTACTTAGAAAACGAAGAGGAAGCATACAACTTAGGTGGCAATACTGATTCTCCTCTGTCAACTGAACAAATACAAACATCTATTGCTGTTAATCCTCGAGTTGTTAGTTATGTCCCTCAAGCACAGAAGTTGCAGGATTTTCCTTACATAATGCACCAACCAATTAGAGCAAGGTAA 1425 0.3881 MGRETVRQESILEPGRRSRLWFSDDIVHVLEENKGTDTIEVIIVDLHKDRKNLAILNLPESQLKCFESLKVFEMLSFLDLEGCKFLTEVPSLSRVPNLGALCLDYCTNLIRIHDSVGFLERLVLISAQGCTQLELLVPSINLPSLETLDLRGCSHLKSFPEVVGVMENIKDVYLDQTALEQFPFTIGNLVGLQRFFLRECQRMIQLPSYILPKVEIITTYGCRGFRSAENEEKASPKVFANAMCVNNEYGKSFLNVYARNISSNDVIEVCSPLYKSELRSFMLSQGCINVGMLRRNESSVVFRFRKKFPRIALSCKVEPGKHFDNMVLDFKLNVLINGTKQLTSSCEYIFYTKGKTDQLFQCDLQCKVEGIFSENEWNYVQILCEIEHLLPCDSKMAMVYRYWTTKSILKWSFIYAYLENEEEAYNLGGNTDSPLSTEQIQTSIAVNPRVVSYVPQAQKLQDFPYIMHQPIRAR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00373 474 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 209 IPR044974 GO:0006952
Trre6g00373 474 Gene3D Ribonuclease Inhibitor 22 237 IPR032675 -
Trre6g00373 474 SUPERFAMILY L domain-like 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00373 Trre-Chr6 2601002 2603451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00373 51 222 WRKY Transcription Factor Family AT4G12020 33.333 1.43e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00373 - - mtr:11415136 574.704