Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00368 ATGGAGAACCATAATAAGGTGCTAATACTAACTGCAATATTACTATTCTTGATGCCCACTTTCTCTAAACAGAACACTCTTACTATTATTGCTCCAAATCAGTTTATCCAATATGGTGATACACTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAAATCTGGAGATCCACCACGCCAATACTTTGGTATATGGTACAAGAGCATATCACCAAGGACTATTGTGTGGGTTGCCAATAGAAACACGCCAGCACAAAACTCAACAGCAATATTGAAACTCACTGATCAAGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGCATTATCTGGAACTCCAATTCATCAAGAATTGGAGTGAAGCCAGTTCTTCAGCTTTTGGATTCAGGAAATCTTGTTCTGAAAGATGAAAACAACACTCAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGTAATACTTTCCTAGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATCGATATCTCACATCTTGGAGAAGCTCTGAAGATCCTGCTGAAGGTGAGTGTTCATATAGGATAGATACTCATGGGTATCCTCAACTGGTTACTGAAAAGGGAGCAAAATTTCTGTATAGAGCAGGGTCATGGAATGGATTTCTTTTCAATGGTGTTTCTTGGCAAAGAATGCACAGAGTCTTGAATTTCTCGGTATTGTTCTCTGACAAAGAATTCTCTTATCAATATGAAGCTTTGAACAGTTCAATTATTACTAGATTGGTGCTAGATCCATCCGGAAATGCACAACGTTTTCTATGGTCAGATAAGACACAAATTTGGGAGTCTATAAATAGTCGGCCTGAGGACCAGTGTGATGATTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCTTAGAAGGTTTCACGCCAAAATTTCAAACAAAATGGAAGTCATCAAATTGGTCAGATGGGTGTGTAAGAAAAACACATTTAAATTGTCTCTATGGAGATGGATTTTTTAAGTACACTAGCATGAAGTTGCCGGATACGTCATCATCGTGGTTTGACAAGAGCTTGAGCCTTGAGGAGTGCAAGACAATGTGTTTGAAAAACTGTTCTTGTACTGCATATGCAAATTTAGATGTCAGAAATGGTGGTAGTGGTTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAAAACATACGGACCTGGGACAAGACATTTATGTACGTCTAGCATCTTCAGAACTTGATCATAAAAAGAATAAGAGGAACTTGAAGCATGCATGGACTCTGGCAGGGATTATTGCATTCCTTATAGGAATAACCCTTATTGTAATGGCCACATTAGCATATAGAAAGAAGCTTGTATGTATACAAAAGTTATTTCACAAGAAGGAGATGGAAGATGGCGACTTGGCAACAATATTTGATTTTTCGATCATCGCTAGTGCAACAAATCACTTCTCTAACAGAAACAAGATAGGAGAAGGTGGTTTTGGACCCGTGTACATGGGCACAATGGTAGATGGCAGAGAAATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAACTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGCTCTATTCAACAAGATGAAAAGTTGTTGGTCTACGAATTCATGCCGAACAGAAGCTTGGACTACTTTATTTTTGATACCACACGAAGTAAATTACTGGATTGGACAAAGCGCTTGGATATTATTGATGGGATTGCTCGGGGGCTGTTGTATCTACATCAGGATTCTAGACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTCATGGGAACATATGGATATATGTCTCCAGAATATGCGGTGTATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAAGAAGAATAGTGGATTTTGTGACCCTCAACATCGTCTAAACCTTCTTGGGCATGCATGGAGATTATGGATTGAAGAAAAGCCAGAGAAGTTAATAGCTGACATATTATATGATGAGGCCATATATTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGCAACCAGAAAATAGGCCTAACATGTCATCTGTGGTATTTATGTTAAAGGGTGAAAAGTTACTCCCCAATCCAAGTGAACCTGGTTTCTATGCAGGAAGAAATAATACAAATAGCACAGGATCTTCTTCAAACGGTTGTTCAATAAATGAAGTTTCAATCTCATTGTTAGAGGCCAGATAG 2439 0.378 MENHNKVLILTAILLFLMPTFSKQNTLTIIAPNQFIQYGDTLVSAAGTFEAGFFKSGDPPRQYFGIWYKSISPRTIVWVANRNTPAQNSTAILKLTDQGSLVILDGSKGIIWNSNSSRIGVKPVLQLLDSGNLVLKDENNTQNFLWESFDYPGNTFLAGMKLKSNLVTGPYRYLTSWRSSEDPAEGECSYRIDTHGYPQLVTEKGAKFLYRAGSWNGFLFNGVSWQRMHRVLNFSVLFSDKEFSYQYEALNSSIITRLVLDPSGNAQRFLWSDKTQIWESINSRPEDQCDDYALCGINSNCNINDFPICECLEGFTPKFQTKWKSSNWSDGCVRKTHLNCLYGDGFFKYTSMKLPDTSSSWFDKSLSLEECKTMCLKNCSCTAYANLDVRNGGSGCLLWFDNIVDMRKHTDLGQDIYVRLASSELDHKKNKRNLKHAWTLAGIIAFLIGITLIVMATLAYRKKLVCIQKLFHKKEMEDGDLATIFDFSIIASATNHFSNRNKIGEGGFGPVYMGTMVDGREIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLVYEFMPNRSLDYFIFDTTRSKLLDWTKRLDIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMSPEYAVYGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPQHRLNLLGHAWRLWIEEKPEKLIADILYDEAIYSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPNPSEPGFYAGRNNTNSTGSSSNGCSINEVSISLLEAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00368 812 Pfam Domain of unknown function (DUF3403) 774 812 IPR021820 GO:0004674
Trre6g00368 812 Gene3D Hepatocyte Growth Factor 338 419 - -
Trre6g00368 812 Gene3D Transferase(Phosphotransferase) domain 1 573 774 - -
Trre6g00368 812 Pfam PAN-like domain 342 406 IPR003609 -
Trre6g00368 812 CDD STKc_IRAK 503 770 - -
Trre6g00368 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Trre6g00368 812 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Trre6g00368 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Trre6g00368 812 SMART ntp_6 341 420 IPR003609 -
Trre6g00368 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Trre6g00368 812 CDD B_lectin 39 152 IPR001480 -
Trre6g00368 812 SUPERFAMILY Protein kinase-like (PK-like) 482 768 IPR011009 -
Trre6g00368 812 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00368 812 Pfam Protein tyrosine and serine/threonine kinase 500 765 IPR001245 GO:0004672|GO:0006468
Trre6g00368 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Trre6g00368 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Trre6g00368 812 Pfam D-mannose binding lectin 75 178 IPR001480 -
Trre6g00368 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 572 - -
Trre6g00368 812 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00368 812 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Trre6g00368 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 759 - -
Trre6g00368 812 Gene3D - 22 149 IPR036426 -
Trre6g00368 812 Gene3D Phosphorylase Kinase; domain 1 470 572 - -
Trre6g00368 812 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Trre6g00368 812 CDD PAN_AP_plant 336 421 - -
Trre6g00368 812 SMART blect_4 33 152 IPR001480 -
Trre6g00368 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00368 Trre-Chr6 2581268 2584676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00368 440 782 Receptor kinase-like Gene Family AT4G23230 53.448 1.60e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00368 PK_Tyr_Ser-Thr 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00368 - - tpra:123915365 1350.5