Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00366 ATGAAGAACCATAATAAGGTGCTAATGCTAATTGTGTGTACTTTCTTCTTTTGCTCCATGCCTACTTTCTCTAATCAGAACACTCTTACTCCAGACCAATTTATTCAATACAATGATACCCTTGTTTCTGCAGGCGGAACCTTTGAAGCAGGATTTTTCAACTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAGAACATATCACCAAGGACTATTATTGTGTGGGTTGCCAATAGAAACACGCCAGCACAAAACTCAACAGTAATGATGAAACTTACTGATGAAGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGCATTATCTGGAACTCCAATTCATCAAGAATTGGAGTGAAACCAGTTGTTCAACTTTTGGATTCAGGAAATCTTGTTCTGAGAGATGCAAACAACACTGAGAACTTTTTGTGGGAAAGTTTTGATTATCCTGGCAATACTCTACTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAGATATCTCACATCTTGGACAAAACCTGAAGATCCTTCTACAGGCGAGTTTTCGTATAAGATAGATACACGTGGTTATCCTCAATTGGTTACTGCAAAAGGAGCAAAAATTCTGTATAGAGGAGGGTCGTGGAATGGAATTCTTTTCACTGGTGTTGCTTGGCAAAGATTGTATAGAATATTTAATTTCTCAATAGTGACCACTGACGAAGAACTCTCTTATCAATATGAAAATCTTGACAATTCAACTATTACAAGAGTGGTGCTAGACCAAAATGGAATTAATCAACGTTTTACATGGTCAGTTAGGACACAAGTTTGGGAGCCTACAGCTATTCGTCCTGCAGACGGTTGTGATGCTTATGCTTTGTGTGGTACCAACTCTATTTGCTATTTTAGTGACTTTCCAAAGTGCAAGTGCTTGGAAGGTTTCGTGCCAAAATTTCAAACAAAATGGAAGTCATCAAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTTCCCATGGAGATGGATTTTTGAATTACACAAGCATGAAGTTGCCAGATACATCATCATCATGGTTTAACAAGAGCTTGAGCCTTGAGAAATGTAAGACAGTGTGTTTGAAAAACTGTTCTTGTACTGCATATGCTAATTTAGATATCAGAAATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAAACTTTCCGGGACAAGGACAAGACATTTACATACGACTCGCATCTTCAGAATTAGATCTTATAAAGAATAAGAGGAATTCGAAGCATGTTGGGACTATTGCAGGGGTTATTGCATTCATTATTGGACTAATCCTTATTGTAATGGTCACATTAGCATATAGAAAGAAGCTTGGATGTATACTAAAGTTATTTCACCAAAAGGAGATAGAAGATGGTGACTCGGCTACTATATTTGATTTTTCGACAATCACTAGTGCAACAAATCACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTATACAAGGGCATTACGGTGGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAATACAAGGAATTGAAGAATTTAAAAATGAATTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTATGCGAAGCAAATTACTGGATTGGACAAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGGCTGTTGTATCTGCATCAGGATTCTAGACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATAATGATATGGTCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAAGCTAAAACAAATAGAGTCATGGGAACATATGGATATATGCCTCCAGAATATGCCGTGAATGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTCCTTGAGATAATTAGCGGTAAGAAGAATAGCGGATTTTGTGACCCTCGACGTCGTCTTAACCTTCTTGGGCACGCATGGAGATTATGGACCGAAGAAAGGCCAGAGGAGTTAATTGCTGACATATTATATGATGAGGCCATATGTTCAGAAATAATAAGATTTATTCATGTTGGTCTATTGTGTGTACAACAGCTACCAGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCCAAACCAAGTGAACCCGGGTTCTACGTAGGAAAAAATAATATGAATAGCACAAGTTCCTCCGTAAATGAAGCTACAATCTCATTGTTCGAGGGGCGATAG 2349 0.3793 MKNHNKVLMLIVCTFFFCSMPTFSNQNTLTPDQFIQYNDTLVSAGGTFEAGFFNFGDPQRQYFGIWYKNISPRTIIVWVANRNTPAQNSTVMMKLTDEGSLVILDGSKGIIWNSNSSRIGVKPVVQLLDSGNLVLRDANNTENFLWESFDYPGNTLLAGMKLKSNLVTGPYRYLTSWTKPEDPSTGEFSYKIDTRGYPQLVTAKGAKILYRGGSWNGILFTGVAWQRLYRIFNFSIVTTDEELSYQYENLDNSTITRVVLDQNGINQRFTWSVRTQVWEPTAIRPADGCDAYALCGTNSICYFSDFPKCKCLEGFVPKFQTKWKSSNWSDGCVRKTHLNCSHGDGFLNYTSMKLPDTSSSWFNKSLSLEKCKTVCLKNCSCTAYANLDIRNGGSGCLLWFDNIVDMRNFPGQGQDIYIRLASSELDLIKNKRNSKHVGTIAGVIAFIIGLILIVMVTLAYRKKLGCILKLFHQKEIEDGDSATIFDFSTITSATNHFSNRNKLGEGGFGPVYKGITVDGQEIAVKRLSKTSIQGIEEFKNELLIYEFMPNRSLDYFIFDTMRSKLLDWTKRLEIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDNDMVPKISDFGLARSFMGDQAEAKTNRVMGTYGYMPPEYAVNGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRRRLNLLGHAWRLWTEERPEELIADILYDEAICSEIIRFIHVGLLCVQQLPENRPNMSSVVFMLKGEKLLPKPSEPGFYVGKNNMNSTSSSVNEATISLFEGR 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00366 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 149 - -
Trre6g00366 782 ProSiteProfiles Protein kinase domain profile. 497 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00366 782 Pfam D-mannose binding lectin 76 177 IPR001480 -
Trre6g00366 782 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Trre6g00366 782 Gene3D Phosphorylase Kinase; domain 1 471 550 - -
Trre6g00366 782 Gene3D Transferase(Phosphotransferase) domain 1 551 750 - -
Trre6g00366 782 Gene3D - 22 149 IPR036426 -
Trre6g00366 782 Gene3D Hepatocyte Growth Factor 337 418 - -
Trre6g00366 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Trre6g00366 782 Pfam Protein tyrosine and serine/threonine kinase 540 703 IPR001245 GO:0004672|GO:0006468
Trre6g00366 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 420 - -
Trre6g00366 782 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 734 - -
Trre6g00366 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 548 751 - -
Trre6g00366 782 Pfam PAN-like domain 340 406 IPR003609 -
Trre6g00366 782 CDD PAN_AP_plant 336 421 - -
Trre6g00366 782 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Trre6g00366 782 CDD B_lectin 27 152 IPR001480 -
Trre6g00366 782 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Trre6g00366 782 SMART serkin_6 497 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00366 782 SMART blect_4 32 152 IPR001480 -
Trre6g00366 782 SUPERFAMILY Protein kinase-like (PK-like) 483 758 IPR011009 -
Trre6g00366 782 SMART ntp_6 341 420 IPR003609 -
Trre6g00366 782 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Trre6g00366 782 PIRSF SRK 541 782 IPR024171 GO:0004674
Trre6g00366 782 PIRSF SRK 1 542 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00366 Trre-Chr6 2570278 2573707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00366 478 759 Receptor kinase-like Gene Family AT4G23230 52.564 2.63e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00366 PK_Tyr_Ser-Thr 3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00366 - - tpra:123915365 1397.1