Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00365 ATGATGAAACTTACTGATCAAGGAAGTCTTGTTATTATTGATGGCTCCAAAGGCATTATCTGGAACTCTAATTCATCAAGAATTGGAGTGAAACCAGTTGTTCAGCTTTTGGATTCTGGAAATCTTGTTCTAAAAGATGCAAACAACACTCAAAACTTTTTGTGGGAAAGTTTTGATTATCCTGATAACACTTTCCTAGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATCGATATCTCACATCTTGGAGAAGCTCTGAAGATCCCGCTCCAGGCGAGTTTTCATATAGGATAGATACACATGGTTATCCTCAACAGGTTACTGAAAAGGGAGTAACAGTTCTGTATAGAGGAGGGTCATGGAATGGAATTCTTTTCACTGGTGTTTCTTGGCTAAGAAAGCATAGAATCTTGAATTTCTCATTAGTGTTCACTGACAAAGAACTCACCTATCAATATGAAAGTCTGAACAATTCAATTATTACTAGAATGGTGATAGATCCATACGGAACTTCACAACGTTTTATTTGGTCAGATAGGACACAAGTTTGGGAGTCTATATCTTCTCGTCCTGCAGACCAGTGTGATGTTTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGACTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCAAACAAAATGGAAGTCATCGAATTGGTCAGATGGGTGTATAAGGAAAACACCTTTAAATTGTCTCCATGGAGATGAATTTTTACCGTACACAAACATGAAGTTGCCAGATACGTCAGCATCGTGGTTTGACAAGAACATGACCCTTGGGGAATGTAAAACAAAGTGTTTGAAAAACTGTTCTTGCACTGCTTATACAAGTTTAGATATCAGTGAGGGTGGGAGTGGCTGCTTACTTTGGTTTGACAACATTATTGACATGAGAATTCATCCAGACCAAGGACAAGACATTTACATACGACTCGCATCTTCAGAATTTGCCCCAGATCATAAAAAGAATAAAAGGAACTTGAAGCTTGTTGGGACTCTTGCAGGAGTTATTGCATTTGTTATAGGACTGACCGTTCTTGTATTGTTCTTGTTAGCATCTAGAAAGAAGCTTGGATGTATAAAAAAGTTATTTCACAAAGAGAAGGATGATGGTGAATTGGCAACAATATTTGAGTTTTCGACCATCACTAATGCAACAAATCACTTCTCTTACAAAAACAAGTTAGGAGAAGGTGGTTTTGGACCGGTGTACAAGGGAATATTGGTAGATGGTCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAATACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGAAATCTTGTAAAACTTCTTGGTTGTTCTATTCAAAAAGATGAAAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGACTACTTTATTTTTGGTACTATGCGAAGCAAATTACTAAATTGGACTAAGCGCTTGGAAATTATTGATGGCATTGCTCGGGGGCTGTTGTATCTCCATCAAGATTCTACACTAAGAATCATTCATAGAGATGTGAAGGCAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATACAGTGACGGGAACATATGGATATATGCCTCCCGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTGGTTGTTCTTGAGATAATTAGCGGTAAGAAGAATAGCGGATTTTGTGACTCTCGACATCGTCTAGACCTTCTTGGGCATGCATGGAGACTATGGATTGAAGAAAGGCCAGAGGAGTTAATAGCTGCTGACATATTATGCGATGAGGCCACATGTTCAGAAATAATAAGATTTATTCATGTGGGCCTTTTGTGTGTACAACAACAACCAGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCTCAACCAAGTGAACCCGGGTTTTATGCAGGAAGAAATAATAAGAATAGCTCAGATTTTTCAATAAATGAAGCTACAATCACATTGGTAGAGGCCCGATAG 2157 0.3769 MMKLTDQGSLVIIDGSKGIIWNSNSSRIGVKPVVQLLDSGNLVLKDANNTQNFLWESFDYPDNTFLAGMKLKSNLVTGPYRYLTSWRSSEDPAPGEFSYRIDTHGYPQQVTEKGVTVLYRGGSWNGILFTGVSWLRKHRILNFSLVFTDKELTYQYESLNNSIITRMVIDPYGTSQRFIWSDRTQVWESISSRPADQCDVYALCGINSNCNINDFPICECLEGFMPKFQTKWKSSNWSDGCIRKTPLNCLHGDEFLPYTNMKLPDTSASWFDKNMTLGECKTKCLKNCSCTAYTSLDISEGGSGCLLWFDNIIDMRIHPDQGQDIYIRLASSEFAPDHKKNKRNLKLVGTLAGVIAFVIGLTVLVLFLLASRKKLGCIKKLFHKEKDDGELATIFEFSTITNATNHFSYKNKLGEGGFGPVYKGILVDGQEIAVKRLSKTSIQGIEEFKNEVKLMATLQHRNLVKLLGCSIQKDEKLLIYEFMPNRSLDYFIFGTMRSKLLNWTKRLEIIDGIARGLLYLHQDSTLRIIHRDVKASNILLDIDMIPKISDFGLARSFMGDQAEANTNTVTGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDSRHRLDLLGHAWRLWIEERPEELIAADILCDEATCSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPQPSEPGFYAGRNNKNSSDFSINEATITLVEAR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00365 718 SMART serkin_6 407 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00365 718 Pfam PAN-like domain 249 315 IPR003609 -
Trre6g00365 718 SUPERFAMILY Protein kinase-like (PK-like) 394 691 IPR011009 -
Trre6g00365 718 ProSiteProfiles Protein kinase domain profile. 407 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00365 718 SMART ntp_6 250 329 IPR003609 -
Trre6g00365 718 CDD PAN_AP_plant 245 330 - -
Trre6g00365 718 Pfam Protein tyrosine and serine/threonine kinase 409 677 IPR001245 GO:0004672|GO:0006468
Trre6g00365 718 Gene3D Hepatocyte Growth Factor 247 332 - -
Trre6g00365 718 Pfam D-mannose binding lectin 2 87 IPR001480 -
Trre6g00365 718 ProSiteProfiles PAN/Apple domain profile. 249 330 IPR003609 -
Trre6g00365 718 PIRSF SRK 1 718 IPR024171 GO:0004674
Trre6g00365 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Trre6g00365 718 Gene3D - 1 58 IPR036426 -
Trre6g00365 718 Pfam S-locus glycoprotein domain 119 228 IPR000858 GO:0048544
Trre6g00365 718 Gene3D Phosphorylase Kinase; domain 1 381 482 - -
Trre6g00365 718 ProSiteProfiles Bulb-type lectin domain profile. 1 57 IPR001480 -
Trre6g00365 718 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 372 482 - -
Trre6g00365 718 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 687 - -
Trre6g00365 718 Gene3D Transferase(Phosphotransferase) domain 1 483 686 - -
Trre6g00365 718 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 248 329 - -
Trre6g00365 718 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 92 IPR036426 -
Trre6g00365 718 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 670 - -
Trre6g00365 718 CDD STKc_IRAK 413 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00365 Trre-Chr6 2565153 2568334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00365 336 718 Receptor kinase-like Gene Family AT4G05200 48.301 1.83e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00365 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00365 - - tpra:123915365 1203.73