Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00364 ATGAAAACATACAAGGTTCTCATGCTAATGCTTCATTTCATTCCAACTTTATGTATACAATATGAAACTTTTTCTACTATTACACCAAATCATTCTTTCCAAGGTAATCAAACTCTAGTGTCTTCAGCTGGAACTTTTGAAGCTGGATTCTTCAACTTTGCAAATTCACAACTTCAACATTTTGGTATATGGTACAAAACAATATCACCAAGAATCTATGTTTGGATTGCCAATAGAGATTCTCCAATACAAAACTCAACACCAATTCTAAAACTAACATATCAAGGTACTCTTACTATTGTTGATGATTCTAGTCCTAGAACCATTATATGGTCCTCAAATGCATCAACAATTGCGGCGAAACCGGTCTTGTCGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGAGAGAATTCTGTGGGAGAGTTTTGATTACCCTGGTGACACTTTCCTTGCAGGAATGAAACTCAGGACAAATTTACTAAATGGTCCTTATATGTCTCTTACATCTTGGAAAAGTGTTGAAGATCCTTCTTTAGGTGAGTTTTCCTATCATATAGATTTTCACGGATTTCCTCAATTAGTTACTACAAAGGGAGAAAATTTATATAGTAGGGGAGGAGCATGGAATGGTTATGCTTTTGGTGGAGTTTCATGGCTAAGGAATCTTAAGTTGTTCAATTTTTCTCTAGTTTTCACTGATAAAGAAGTTTCTTATGAGTATGAAACATTGAAAAAAGAAACTATTACTAGATTATGGCTTAGTCCATCAGGTTCTTCGCAGAGATTGGTATGGTCAGAGAGGAGAAAAGATTGGGATACTATATCGACTCGGCCGATGGATTCGTGTGCATATTATTCAATTTGTGGTGCTAATTCTATCTGCAATATCACAAACTCTCCAAGAATATGTAAATGCTTGGAAGGTTTTTTACCAAAGTATTATGAAAAGTGGAATTCTTTGGATTGGTCTGGTGGATGTGTTAGAAGTATAAGGTTAAATTGTATTGGAGATGAATTTCTAAAGCACTCAGGAGTAGAGTTGCCAGATACATCCTCTTCATGGTTTAACAAGAGCTTGAGCCTTGAGGAATGTGAGAAAATGTGTTTGAAAAATTGCTCTTGTACAGCATATGCAAGTTTAGATATTAAAAGTAATAGTGGCTGTTTGCTTTGGTTTGGCAAGATATGGGACTTGACAAAACATATAGACCAAGGACAAGATATTTTCATAAGACTGGCAGCCTCAGAGTTAGATCATAGACGAAATAGGTGGAGCATTAACAACAAGAAGCTTGCAGTGGCACTAGTAGGAATCATTTTATTCATCATGATTCTTGGACTAGCCACATTTACATATATAAAGAGAAAGAAGCTTGCAAAACCAGGGATGCTAAAAATATTTCATAGGAAGCACAAAAGAGAGAGGGAAGATGTGCAATTATCAACAATATTTGGTTTTTCAACCATATCTAATGCCACAAATCGCTTTTCAGACGATAACAAGATAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCATATTGGAAGATGGACTAGAGATTGCAGTCAAGAGGCTATCAAAAACATCAGAACAAGGAGAAGAGCAGTTTAAAAATGAAGTCATAGGAGATCAAGATAAGTCTAACACAAAAAGATTGATGGGAACATATGGTTATATGCCACCTGAATATGCGGTGCATGGATGTTTTTCAATCAAATCTGACGTTTTTAGCTTTGGCGTAATTGTTCTTGAGATAATTAGTGGGAGAAGGATTCGAAATTTTTATGACCAACATCATCATCTTAATCTTCTTGGTCATGCATGGAAACTGTGGAATGAAGAAAAGGCACAAGAGCTAATAGATGACATATTCCATGGTACAATCATTCCATGTGAAATATTGAGATGTATTCATGTTGGTCTACTATGTGTTCAACAAATACCAGAACATAGACCAAACATGTCATCTGTGGTCTTAATGTTGAATGGTGAAAAACTGTTGCCTGATCCTAGCCAACCTGGGTTCTATACTTCAACAGCTCATCTTCCAATTCAAGTAGAATCTTCTTCAAGAAGTTGTGGAGATTGTTCACAAAATGAAGCTTCTGTGTCATTGTTAGAGGCACGGTAG 2142 0.3623 MKTYKVLMLMLHFIPTLCIQYETFSTITPNHSFQGNQTLVSSAGTFEAGFFNFANSQLQHFGIWYKTISPRIYVWIANRDSPIQNSTPILKLTYQGTLTIVDDSSPRTIIWSSNASTIAAKPVLSLLDSGNLVVKDGERILWESFDYPGDTFLAGMKLRTNLLNGPYMSLTSWKSVEDPSLGEFSYHIDFHGFPQLVTTKGENLYSRGGAWNGYAFGGVSWLRNLKLFNFSLVFTDKEVSYEYETLKKETITRLWLSPSGSSQRLVWSERRKDWDTISTRPMDSCAYYSICGANSICNITNSPRICKCLEGFLPKYYEKWNSLDWSGGCVRSIRLNCIGDEFLKHSGVELPDTSSSWFNKSLSLEECEKMCLKNCSCTAYASLDIKSNSGCLLWFGKIWDLTKHIDQGQDIFIRLAASELDHRRNRWSINNKKLAVALVGIILFIMILGLATFTYIKRKKLAKPGMLKIFHRKHKREREDVQLSTIFGFSTISNATNRFSDDNKIGQGGFGPVYKGILEDGLEIAVKRLSKTSEQGEEQFKNEVIGDQDKSNTKRLMGTYGYMPPEYAVHGCFSIKSDVFSFGVIVLEIISGRRIRNFYDQHHHLNLLGHAWKLWNEEKAQELIDDIFHGTIIPCEILRCIHVGLLCVQQIPEHRPNMSSVVLMLNGEKLLPDPSQPGFYTSTAHLPIQVESSSRSCGDCSQNEASVSLLEAR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00364 713 CDD B_lectin 35 148 IPR001480 -
Trre6g00364 713 SUPERFAMILY Protein kinase-like (PK-like) 486 689 IPR011009 -
Trre6g00364 713 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Trre6g00364 713 SMART tyrkin_6 499 665 IPR020635 GO:0004713|GO:0006468
Trre6g00364 713 Gene3D Hepatocyte Growth Factor 337 413 - -
Trre6g00364 713 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 178 IPR036426 -
Trre6g00364 713 CDD TM_EGFR-like 434 463 - -
Trre6g00364 713 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 545 670 - -
Trre6g00364 713 Pfam D-mannose binding lectin 73 174 IPR001480 -
Trre6g00364 713 SMART blect_4 30 148 IPR001480 -
Trre6g00364 713 SMART ntp_6 337 415 IPR003609 -
Trre6g00364 713 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Trre6g00364 713 ProSiteProfiles PAN/Apple domain profile. 337 416 IPR003609 -
Trre6g00364 713 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 656 - -
Trre6g00364 713 Gene3D - 19 145 IPR036426 -
Trre6g00364 713 CDD PAN_AP_plant 335 416 - -
Trre6g00364 713 Pfam Protein tyrosine and serine/threonine kinase 549 662 IPR001245 GO:0004672|GO:0006468
Trre6g00364 713 Gene3D Transferase(Phosphotransferase) domain 1 549 666 - -
Trre6g00364 713 PIRSF SRK 1 546 IPR024171 GO:0004674
Trre6g00364 713 PIRSF SRK 545 713 IPR024171 GO:0004674
Trre6g00364 713 Pfam PAN-like domain 339 400 IPR003609 -
Trre6g00364 713 Gene3D Phosphorylase Kinase; domain 1 475 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00364 Trre-Chr6 2560142 2563496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00364 547 680 Receptor kinase-like Gene Family AT4G23140 51.064 1.76e-39 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00364 PK_Tyr_Ser-Thr 3.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00364 - - tpra:123913214 909.057