Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00363 ATGCAAACATACAAGGTTCTTCTCATGCTAATGCTTCAACTCATTCCAACTTTATGTATACAATATGAAACTTTTTCTACAATTACACCAAATCACTCTATCCAAGTTAATCAAACTTTAGTGTCTTCAGCTGGAACTTTTGAAGCTGGATTCTTCAGCCTTGCAAATTCACAACTTCAATATTTTGGTATATGGTACAAAACAATATCACCTAGAATCTATGTTTGGATTGCAAATAGAGATTCTCCAATACAAAACTCAACACCAATTCTAAAACTTACATATCAAGGTACTCTTACTATTGTTGATGATTCCAGAACCATTATATGGTCCTCCAATGCATCAACAATTGCGGTAAAACCGGTCTTGTCGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAAAAAGAATTATGTGGGAGAGTTTTGATTACCCTGGTGACACTTTGCTTCCAGGAATGAAACTCAAGACAAATTTACTAAATGGTCCTTATAGGTCTCTTACATCTTGGAAAAGTGTTGATGATCCTTCTTTAGGCGTGTTTTCTTATCAGATATATTTTCATGGATTTCCTCAATTAGTTATTACAAAGGGAGGAAATATGTATAGTAGGGGAGTAGCTTTGAATAAGGGTAATAATAATAGTCGACTTTCATTGCTAAGGAATCTTAAGTTGGTCAAATTTTCTATAATGTTAAATGATAAAGAAGTTTCTTATGAGTATGAAACTTTGAAAAATGAAACTATTACTAGATTTTGGCTGAATCCATCAGGTTATTCACAGAGATTGGTATGGTCAGATAGTAGAAAAGATTGGGATATTATATCGACTCGTCCGTTGGATCTTTGTGCATATTATTCAAGCTGTGGTGATAATTCTATCTGCAATATTATAAACTCTCCAAGAATATGTGAATGCTTGGAAGGTTTTGTACCAAAGTATTATGAAAAGTGGAATTCTATAGATTGGTCTGGTGGATGTGTTAGAAGAGTTAAGTTAAATTGTAGTGGAGATGGATTTTTGAAGCATTTAAGAGTTGAGTGGCCAGATACATCCTCTTCATGGTTATACAAGAGTTTGAATCTTGAAGAATGTGAGAAAAAATGTTTGAAAAATTGTTCTTGTTCAGCATATGCAATTTTAGATGTTAAAAGTAATAGTGGATGTTTGCTTTGGTTTGGAAATATAAGGGACTTGAAAACATATACAGACCAAGGACAAGATATTTTCATCAGACTTGCAGCTTCAGAGTTAGATCATGGAAGAAATAGGAGGAGCTTTAACAAAATGAAGCTTGCAGGGGCACTGGTAGCAGTCATTTTATTCATCATAGTTCTTGGACTAGCTACATTTGCATATATAAAGAGAAAGAAGCTTGCAAAACCAGGTGAATTTAAAATAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCATATTGGAAGATGGACTAGAGATTGCAGTGAAGAGGCTATCAGAAAAATCAGCACAAGGAGAAGAACAGTTCAAAAATGAAGTCATGCTGATGGCGAAGCTTCAGCATCGCAATCTTGTAAAACTTCTTGGTTGTTCAATATACCAAAAGGAAAAGCTCTTGATCTATGAATTGATGCCCAACAGAAGCTTGAATTATTTCATTTTTGATTCAACGCGAAAGAAACTGCTAGATTTGATCAAACGGTTCCAAATTATTGATGGGATTGCTCGAGATTTTGGTCTGGCTAGAATATTTATTGGGGATCAAGATGAGTCTAACACAAATAGATTGATGGGAACATATGGTTATATGCCACCTGAATATGCAGTGCGTGGATGTTTTTCAATCAAATCTGATGTTTTTAGCTTTGGAGTAATTGTTCTCGAGATAATTAGTGGGAGAAGGATTCGAAATTTTTATGACCCACATCGTCATCATCTAAATCTGCTGGGTCATGCATGGAGACTGTGGAGTGAAGAAAAGGCACAAGAGTTAATAGATGAGTTATTCCATGGTACAATCATTCCATGTGAAATTCTGAGATGTATTCATGTTGGTCTACTATGTGTTCAACAAATACCAGAACTTAGACCAAACATGTCATCTGTGGTCTTAATGTTGAATAGTGAAAAACTGTTGCCTGAGCCTAGCCAACCTGGGTTCTATACAGAAACAGCTCATCATCCAATTCAGGTAGAATCTTCTCCAAGAAGTTGTGAAGATTGTTCACAAAATGAAGCTTCTATGTCAATGTTAGAGGCACGGTAG 2250 0.3547 MQTYKVLLMLMLQLIPTLCIQYETFSTITPNHSIQVNQTLVSSAGTFEAGFFSLANSQLQYFGIWYKTISPRIYVWIANRDSPIQNSTPILKLTYQGTLTIVDDSRTIIWSSNASTIAVKPVLSLLDSGNLVVKDGKRIMWESFDYPGDTLLPGMKLKTNLLNGPYRSLTSWKSVDDPSLGVFSYQIYFHGFPQLVITKGGNMYSRGVALNKGNNNSRLSLLRNLKLVKFSIMLNDKEVSYEYETLKNETITRFWLNPSGYSQRLVWSDSRKDWDIISTRPLDLCAYYSSCGDNSICNIINSPRICECLEGFVPKYYEKWNSIDWSGGCVRRVKLNCSGDGFLKHLRVEWPDTSSSWLYKSLNLEECEKKCLKNCSCSAYAILDVKSNSGCLLWFGNIRDLKTYTDQGQDIFIRLAASELDHGRNRRSFNKMKLAGALVAVILFIIVLGLATFAYIKRKKLAKPGEFKIGQGGFGPVYKGILEDGLEIAVKRLSEKSAQGEEQFKNEVMLMAKLQHRNLVKLLGCSIYQKEKLLIYELMPNRSLNYFIFDSTRKKLLDLIKRFQIIDGIARDFGLARIFIGDQDESNTNRLMGTYGYMPPEYAVRGCFSIKSDVFSFGVIVLEIISGRRIRNFYDPHRHHLNLLGHAWRLWSEEKAQELIDELFHGTIIPCEILRCIHVGLLCVQQIPELRPNMSSVVLMLNSEKLLPEPSQPGFYTETAHHPIQVESSPRSCEDCSQNEASMSMLEAR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00363 749 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 579 706 - -
Trre6g00363 749 CDD B_lectin 31 147 IPR001480 -
Trre6g00363 749 CDD PAN_AP_plant 333 416 - -
Trre6g00363 749 Pfam S-locus glycoprotein domain 226 315 IPR000858 GO:0048544
Trre6g00363 749 Pfam PAN-like domain 337 400 IPR003609 -
Trre6g00363 749 ProSiteProfiles Protein kinase domain profile. 463 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00363 749 Gene3D Transferase(Phosphotransferase) domain 1 454 573 - -
Trre6g00363 749 Pfam Protein tyrosine and serine/threonine kinase 572 630 IPR001245 GO:0004672|GO:0006468
Trre6g00363 749 Pfam Protein tyrosine and serine/threonine kinase 468 566 IPR001245 GO:0004672|GO:0006468
Trre6g00363 749 Gene3D - 20 144 IPR036426 -
Trre6g00363 749 SMART ntp_6 337 415 IPR003609 -
Trre6g00363 749 SUPERFAMILY Protein kinase-like (PK-like) 468 720 IPR011009 -
Trre6g00363 749 SMART blect_4 31 147 IPR001480 -
Trre6g00363 749 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 178 IPR036426 -
Trre6g00363 749 Pfam D-mannose binding lectin 74 173 IPR001480 -
Trre6g00363 749 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 692 - -
Trre6g00363 749 PIRSF SRK 572 749 IPR024171 GO:0004674
Trre6g00363 749 PIRSF SRK 1 466 IPR024171 GO:0004674
Trre6g00363 749 PIRSF SRK 462 571 IPR024171 GO:0004674
Trre6g00363 749 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre6g00363 749 Gene3D Transferase(Phosphotransferase) domain 1 574 712 - -
Trre6g00363 749 ProSiteProfiles PAN/Apple domain profile. 337 416 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00363 Trre-Chr6 2553765 2557400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00363 427 715 Receptor kinase-like Gene Family AT4G23230 43.785 6.55e-87 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00363 PK_Tyr_Ser-Thr 3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00363 - - gmx:100803275 961.444