Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00362 ATGCAAACATACAAGGTTCTTCTCATGCTAATGCTTCAACTCATTCCAACTTTATGTATACAATATGAAACTTTTTCTACAATTACACCAAATCACTCTATCCAAGTTAATCAAACTTTAGTGTCTTCAGCTGGAACTTTTGAAGCTGGATTCTTCAGCCTTGCAAATTCACAACTTCAATATTTTGGTATATGGTACAAAACAATATCACCTAGAATCTATGTTTGGATTGCAAATAGAGATTCTCCAATACAAAACTCAACACCAATTCTAAAACTTACATATCAAGGTACTCTTACTATTGTTGATGATTCCAGAACCATTATATGGTCCTCCAATGCATCAACAATTGCGGTAAAACCGGTCTTGTCGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAAAAAGAATTATGTGGGAGAGTTTTGATTACCCTGGTGACACTTTGCTTCCAGGAATGAAACTCAAGACAAATTTACTAAATGGTCCTTATAGGTCTCTTACATCTTGGAAAAGTGTTGATGATCCTTCTTTAGGCGTGTTTTCTTATCAGATATATTTTCATGGATTTCCTCAATTAGTTATTACAAAGGGAGGAAATATGTATAGTAGGGGAGTAGCTTTGAATAAGGGTAATAATAATAGTCGACTTTCATTGCTAAGGAATCTTAAGTTGGTCAAATTTTCTATAATGTTAAATGATAAAGAAGTTTCTTATGAGTATGAAACTTTGAAAAATGAAACTATTACTAGATTTTGGCTGAATCCATCAGGTTATTCACAGAGATTGGTATGGTCAGATAGTAGAAAAGATTGGGATATTATATCGACTCGTCCGTTGGATCTTTGTGCATATTATTCAAGCTGTGGTGATAATTCTATCTGCAATATTATAAACTCTCCAAGAATATGTGAATGCTTGGAAGGTTTTGTACCAAAGTATTATGAAAAGTGGAATTCTATAGATTGGTCTGGTGGATGTGTTAGAAGAGTTAAGTTAAATTGTAGTGGAGATGGATTTTTGAAGCATTTAAGAGTTGAGTGGCCAGATACATCCTCTTCATGGTTATACAAGAGTTTGAATCTTGAAGAATGTGAGAAAAAATGTTTGAAAAATTGTTCTTGTTCAGCATATGCAATTTTAGATGTTAAAAGTAATAGTGGATGTTTGCTTTGGTTTGGAAATATAAGGGACTTGAAAACATATACAGACCAAGGACAAGATATTTTCATCAGACTTGCAGCTTCAGAGTTAGATCATGGAAGAAATAGGAGGAGCTTTAACAAAATGAAGCTTGCAGGGGCACTGGTAGCAGTCATTTTATTCATCATAGTTCTTGGACTAGCTACATTTGCATATATAAAGAGAAAGAAGCTTGCAAAACCAGGGATGCTAAAAATATTTTATAGGAAGCACAAAAGAGATAAGGAAGATGTGCAGTTATCAACAATATTTGATTTTTCAACCATATCTAATGCTACAAATCACTTTTCGGACGATAACAAGATAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCATATTGGAAGATGGACTAGAGATTGCAGTGAAGAGGCTATCAGAAAAATCAGCACAAGGAGAAGAACAGTTCAAAAATGAAGTCATGCTGATGGCGAAGCTTCAGCATCGCAATCTTGTAAAACTTCTTGGTTGTTCAATATACCAAAAGGAAAAGCTCTTGATCTATGAATTGATGCCCAACAGAAGCTTGAATTATTTCATTTTTGATTCAACGCGAAAGAAACTGCTAGATTTGATCAAACGGTTCCAAATTATTGATGGGATTGCTCGAGATTTTGGTCTGGCTAGAATATTTATTGGGGATCAAGATGAGTCTAACACAAATAGATTGATGGGAACATATGGTTATATGCCACCTGAATATGCAGTGCGTGGATGTTTTTCAATCAAATCTGATGTTTTTAGCTTTGGAGTAATTGTTCTCGAGATAATTAGTGGGAGAAGGATTCGAAATTTTTATGACCCACATCGTCATCATCTAAATCTGCTGGGTCATGCATGGAGACTGTGGAGTGAAGAAAAGGCACAAGAGTTAATAGATGAGTTATTCCATGGTACAATCATTCCATGTGAAATTCTGAGATGTATTCATGTTGGTCTACTATGTGTTCAACAAATACCAGAACTTAGACCAAACATGTCATCTGTGGTCTTAATGTTGAATAGTGAAAAACTGTTGCCTGAGCCTAGCCAACCTGGGTTCTATACAGAAACAGCTCATCATCCAATTCAGGTAGAATCTTCTCCAAGAAGTTGTGAAGATTGTTCACAAAATGAAGCTTCTATGTCAATGTTAGAGGCACGGTAG 2358 0.3533 MQTYKVLLMLMLQLIPTLCIQYETFSTITPNHSIQVNQTLVSSAGTFEAGFFSLANSQLQYFGIWYKTISPRIYVWIANRDSPIQNSTPILKLTYQGTLTIVDDSRTIIWSSNASTIAVKPVLSLLDSGNLVVKDGKRIMWESFDYPGDTLLPGMKLKTNLLNGPYRSLTSWKSVDDPSLGVFSYQIYFHGFPQLVITKGGNMYSRGVALNKGNNNSRLSLLRNLKLVKFSIMLNDKEVSYEYETLKNETITRFWLNPSGYSQRLVWSDSRKDWDIISTRPLDLCAYYSSCGDNSICNIINSPRICECLEGFVPKYYEKWNSIDWSGGCVRRVKLNCSGDGFLKHLRVEWPDTSSSWLYKSLNLEECEKKCLKNCSCSAYAILDVKSNSGCLLWFGNIRDLKTYTDQGQDIFIRLAASELDHGRNRRSFNKMKLAGALVAVILFIIVLGLATFAYIKRKKLAKPGMLKIFYRKHKRDKEDVQLSTIFDFSTISNATNHFSDDNKIGQGGFGPVYKGILEDGLEIAVKRLSEKSAQGEEQFKNEVMLMAKLQHRNLVKLLGCSIYQKEKLLIYELMPNRSLNYFIFDSTRKKLLDLIKRFQIIDGIARDFGLARIFIGDQDESNTNRLMGTYGYMPPEYAVRGCFSIKSDVFSFGVIVLEIISGRRIRNFYDPHRHHLNLLGHAWRLWSEEKAQELIDELFHGTIIPCEILRCIHVGLLCVQQIPELRPNMSSVVLMLNSEKLLPEPSQPGFYTETAHHPIQVESSPRSCEDCSQNEASMSMLEAR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00362 785 CDD B_lectin 31 147 IPR001480 -
Trre6g00362 785 Pfam Protein tyrosine and serine/threonine kinase 608 666 IPR001245 GO:0004672|GO:0006468
Trre6g00362 785 Pfam Protein tyrosine and serine/threonine kinase 502 602 IPR001245 GO:0004672|GO:0006468
Trre6g00362 785 CDD PAN_AP_plant 333 416 - -
Trre6g00362 785 SUPERFAMILY Protein kinase-like (PK-like) 483 756 IPR011009 -
Trre6g00362 785 Gene3D - 20 144 IPR036426 -
Trre6g00362 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 574 - -
Trre6g00362 785 ProSiteProfiles Protein kinase domain profile. 499 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00362 785 PIRSF SRK 608 785 IPR024171 GO:0004674
Trre6g00362 785 PIRSF SRK 1 607 IPR024171 GO:0004674
Trre6g00362 785 Gene3D Transferase(Phosphotransferase) domain 1 600 748 - -
Trre6g00362 785 Gene3D Phosphorylase Kinase; domain 1 466 574 - -
Trre6g00362 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 615 742 - -
Trre6g00362 785 SMART ntp_6 337 415 IPR003609 -
Trre6g00362 785 SMART blect_4 31 147 IPR001480 -
Trre6g00362 785 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 728 - -
Trre6g00362 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 178 IPR036426 -
Trre6g00362 785 Pfam S-locus glycoprotein domain 226 315 IPR000858 GO:0048544
Trre6g00362 785 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre6g00362 785 Pfam PAN-like domain 337 400 IPR003609 -
Trre6g00362 785 ProSiteProfiles PAN/Apple domain profile. 337 416 IPR003609 -
Trre6g00362 785 Pfam D-mannose binding lectin 74 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00362 Trre-Chr6 2553765 2557400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00362 427 751 Receptor kinase-like Gene Family AT4G23230 45.152 4.48e-96 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00362 PK_Tyr_Ser-Thr 3.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00362 - - tpra:123913214 1197.57