Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00317 ATGGAAGCCCTTGCTGTTACAATCTTGGAAAAATTGTGCTCTTCTGCTTACAAAGAACTTGGAATCATTTGGAATCTCAAAGAGGATATCGAACGAATGAAGAACACAGTCTCCATGATAAAAGCCGTGCTCCTCGGTGCAGAGGCCAAAGCCAATAATCATCAAGTTAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGATTTACTAGATGATTTTTCCATTGAAGATTTGAATAGAAAAGTGATGGCTAGAAACAGCATAGTAAGACATACACAATTTTTCTTCTCAAAACCAAACAAACTTGCTTATGGCCATAAATTGGGCCATAAAATGAAGGCAATCCAAAAGAGGCTAGATGACATTGCTAAAATTAAGCATGCACTGCAACTCAATGACCGCCCGATCGAGAATCCAATTGTATATCGTGAACAAAGACAAACTTACTCTTTTGTGAGTGAAGATGAAGTTATTGGAAGAGATGAGGAAAAGAAATGTATTAAAAGTTATCTACTTGACATCAATGCAACAGATAATGTTTCGATAATTCCCATAGTCGGCATTGGAGGATTAGGTAAAACTGCACTTGCTCAGTTAATCTACAATGATGTCGATGTTCAAAGGAATTTTGAGCTAAAAATGTGGGTGTATGTCTCGGATGAATTTGATATCAAGAAAGTAGCTCAAGATATCGTTGGGGACGAAAAGAATAGTAAGATGGAGGTGGTGCAACAAAAACTTAGAAACAAAATTGAAGGGAAGAAGTTTTTGCTTGTGTTAGACGACATGTGGAATGAGGATCGTGAGTTGTGGCTGAAATTGAAGAGCTTGTTCGTGGAAGGAGGAAAAGGAAGCATGATAATTGTTACAACCCGTAGTCAGACTGTGGCAAAAATCACGGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAAAAATCACAGGAGCTATTCTCTCGAGTAGCTTTCGGTGAGTTGAAAGAACAAAATGATTTGGAGCTGTTAGATATAGGAAGGGACATTGTTAAGAAATGTGCCGGCATTCCCCTCACCATAAGAACTATTGGCAGCCTTTTATTTTCGCGAAATTTGGGAAGAAGTGATTGGCTATATTTCAAGGATGTTGAGTTTTCAAAGATAGATCAACACAAGGACAAAATCTTTGAAATCCTTAAACTGGGTTATGATCATCTTCCCTCATTTCTGAAAAAATGTTTTGCTTATTGTTCATTGTTTCCTAAAGGTTTTGTGTTTGAAAAAAACACACTCATTCAGTTATGGGTAGCTGAGGGGTTCATTCAACAATCAAATGATATTAGATGTGTAGAAGATGTCGGTCATGAGTACTTCATGAGTTTGCTTTCAATGTCCTTCTTTCAAGATGTCACTATAGATGATTGTGGTGGCGTAAGTACTTGCAAAATGCATGACCTTATGCATGATCTAGCACAGCTAATGGCCGGGAATGAATATGTCGTGGTTGAAGGAGAAGAACTAAACATAGGAAACAAAACACGTTATTTGTCATCTCGTACTGCATTACAGTTGGCACCTACACCATCTTCCTACAAGTTAAGGACGTTTCTTTTACGTCCACAGATCAATGCAAGCAATTATTTGCGTCAGTCACACGATCTTTCCTTGCCAGGCCTAAAATTCTTACGTGTGTTGACACTTTGTGGGTTGAAAATTGTAGCAATTACTAATAGTTTTGCAGAGATGAAGCATTTAAGATACATTGATCTATCACAGAATACTCTACTGAAACATCTTCCACCGGGCATTACTAGCCTACAGAACTTACAAACTCTAAAACTTTCTGGATGTGCTGATCTCAGGTTATTACCAGAAAATATCAATAAAAGTTTGAGGCATCTTGAGTTGAATGGTTGCAATAGATTGACATGTATGCCACAAGGGTTAGGAAAGTTGACAAATCTTCAAACGCTAACATGTTTTGTACTGAGCAACGGAAGTACAAGTGTCGATGAGTTGGGTGAGCTAAACAACCTTAGAGGGAGATTAGAAATAAAAGGATTGGATTTCCTGCAAAATAATGCTGCAGAGATTCAATCTGCAAAAGTACTTCTTGGGAAGCGACACCTTCAACAGTTGGAATTGCGGTGGTTGTATGATGACGATTCCCATCCATGGTTGTCAACACCGTGGTTGTCAACACCGTCATTACTCGTCGAACAAAAAGGATCCTGTCTGGAAGATGAGATGATTTTACAAGGCCTGCAGCCACACCGCTCACTTCAAAAACTAGTTATAGATGGATTTTGCGGCAAAAGGTTACCAGACTGGATAGGGAATCTCTCATCGCTCTTGACTCTTGAGTTACACAATTGCAATTATTTGACATCACTACCCGAAGCAATAAGTAACCATGTATCTTTGCAGAAACTTTGCATTTATAACTGCTTACTGTTACAAGAAAGATACGCAAGACCATATGGTAAAGACTGGCGAAGAATCTCTTCCATCCGAGAAGCTGAGATACTTCCTATGCGACCATCAATATTCAAGTATTTTACTTGA 2559 0.3865 MEALAVTILEKLCSSAYKELGIIWNLKEDIERMKNTVSMIKAVLLGAEAKANNHQVSNWLEELKDVLYDADDLLDDFSIEDLNRKVMARNSIVRHTQFFFSKPNKLAYGHKLGHKMKAIQKRLDDIAKIKHALQLNDRPIENPIVYREQRQTYSFVSEDEVIGRDEEKKCIKSYLLDINATDNVSIIPIVGIGGLGKTALAQLIYNDVDVQRNFELKMWVYVSDEFDIKKVAQDIVGDEKNSKMEVVQQKLRNKIEGKKFLLVLDDMWNEDRELWLKLKSLFVEGGKGSMIIVTTRSQTVAKITGTHPPLFLKGLDSQKSQELFSRVAFGELKEQNDLELLDIGRDIVKKCAGIPLTIRTIGSLLFSRNLGRSDWLYFKDVEFSKIDQHKDKIFEILKLGYDHLPSFLKKCFAYCSLFPKGFVFEKNTLIQLWVAEGFIQQSNDIRCVEDVGHEYFMSLLSMSFFQDVTIDDCGGVSTCKMHDLMHDLAQLMAGNEYVVVEGEELNIGNKTRYLSSRTALQLAPTPSSYKLRTFLLRPQINASNYLRQSHDLSLPGLKFLRVLTLCGLKIVAITNSFAEMKHLRYIDLSQNTLLKHLPPGITSLQNLQTLKLSGCADLRLLPENINKSLRHLELNGCNRLTCMPQGLGKLTNLQTLTCFVLSNGSTSVDELGELNNLRGRLEIKGLDFLQNNAAEIQSAKVLLGKRHLQQLELRWLYDDDSHPWLSTPWLSTPSLLVEQKGSCLEDEMILQGLQPHRSLQKLVIDGFCGKRLPDWIGNLSSLLTLELHNCNYLTSLPEAISNHVSLQKLCIYNCLLLQERYARPYGKDWRRISSIREAEILPMRPSIFKYFT 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00317 852 Pfam Leucine rich repeat 560 615 IPR001611 GO:0005515
Trre6g00317 852 Gene3D Ribonuclease Inhibitor 531 823 IPR032675 -
Trre6g00317 852 FunFam Probable disease resistance protein At1g63360 401 491 - -
Trre6g00317 852 Pfam NB-ARC domain 182 402 IPR002182 GO:0043531
Trre6g00317 852 Gene3D - 145 307 IPR027417 -
Trre6g00317 852 SUPERFAMILY L domain-like 480 816 - -
Trre6g00317 852 PRINTS Disease resistance protein signature 351 365 - -
Trre6g00317 852 PRINTS Disease resistance protein signature 254 268 - -
Trre6g00317 852 PRINTS Disease resistance protein signature 186 201 - -
Trre6g00317 852 PRINTS Disease resistance protein signature 602 618 - -
Trre6g00317 852 Gene3D - 6 116 - -
Trre6g00317 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 415 IPR027417 -
Trre6g00317 852 Pfam Rx N-terminal domain 8 94 IPR041118 -
Trre6g00317 852 Gene3D - 395 491 IPR036388 -
Trre6g00317 852 FunFam Probable disease resistance protein At1g61300 145 309 - -
Trre6g00317 852 PANTHER DISEASE RESISTANCE PROTEIN RP 41 811 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00317 Trre-Chr6 2254173 2256731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00317 167 421 WRKY Transcription Factor Family AT5G45050 24.818 4.39e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00317 - - mtr:11424880 1144.41