Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre6g00282 | ATGAAGAAAACTTTTTCCACCAACAGCGCCACCCGGCGCGACTCATATTACCACCGTCAACCACCGTCTCCCATCTTTCATCACCGGAACCCCAGATTCCACTCCAACCACCGCCATCTCCCTACTCATCCCCGCCACCCCACTTTTACCATCAACCTCCGCTTCAACCACCGTATTCACCGCCGTGACCTCTGCCGCGACGACATTGAATCTCTGATAAAAAAATGCAATCCAAATCCCGACAATTTCACATTCAACACCAACGACAGCATCGCCGCTTCACTCAATTTCAATCAGAAAACAGACGCGATCAACGCCGTCGTTTGGTTCTGGCAATCACGCCTCTCAGTGAATTCAAATCCAATCCACGATTTCACGCCGGAGTTCATAATGAACTCCGACAATGTCGAACTCGATGTTCGTCTTCGAAACGTGTTCGTCAGCCACGTTAAGGAATTAATGAATGGAAACGAAGTGAATCGATGGATAGAAGAATGGGATCGATTATTAAAAGAGATTAATCATGTTAATAGCTTATTAAGTAAATCTTCTCCAATTAGGGTTCAAGAACAGAATATTGATAGAAAAAAAGCACTTGATGGTGAAAAGAGTTTAATTGAAAGAAGATTAAAGGAATTTGAATCTGCTATGGAGTGTATTTTGAAGTATTTAGAAGAGAAGAATAATCTTGAAAATGGTGATTATGATTATGATTATGAAGTTGTTAATGTGTTTAGGTTTGGTGAAAAATTTGATTGGGAGAAGATTTATAATTTAATTGTTAGGGAACGTTGTAGATTTGAAGAAGGTTTGCCTATTTATGCTTATAGGAGGGAAATTCTTCAGCAATTACATCATCAAAAGATAACAGTGTTGATTGGAGAGACGGGTTCTGGGAAGAGTACTCAAATAGTGCAGTTTCTCGCTGATTCAGGTCTTGGGGCCAATGAGTCAATTGTATGCACTCAACCTCGCAAGATTGCTGCGAAATCATTGGCTGAAAGGGTCCGGGAGGAATGTGGTGGATGTTATGAAGACAATTCAATCAAGTGTTATTCCACGTTTTCATCTTGGAACAAGTTTGATTCCAGGATAACCTTCATGACAGATCACTGTTTATTACAACACTACATGAGTGATAAGAATTTGTCTGGGATCTCGTGTATTATAGTGGATGAGGCTCATGAAAGGAGTATAAATACTGATTTACTGTTGGCGTTAATAAAGAATTTACTTTGTAAGAGGGTTGAAATGCGGCTTATCATCATGTCTGCTACGGCTGATGCAAAGCAACTATCTGATTACTTCTATAGTTGTGGAATTTTTCGTGTCCTTGGGAGAAACTTCCCTGTGGAGGTGAGATATGTTCCTTCTGACTGTGGAGGACGTTCTGGTTCTGCTGTTGTGGACTCGTATGTTTCCGATGTTGTCAAAATGGCAACTGAAATTCACTCAACAGAGAATGAAGGAACTATTCTTGCCTTTCTTACCTCACAGTTAGATGTAGAATGGGCCTGTGAAAAGTTTGAATCCCGCTCTGCAGTTGCTTTACCCTTGCATGGAAAACTTTCGTCTGAAGAGCAATTTCATGTTTTCCGGGACTATCCTGGAAAAAGAAAAGTGATATTTTCAACGAATGTTGCAGAGACGTCACTTACAATTCCTGGTGTTAAGTATGTGATAGATTCTGGATTGGTTAAAGATAGTCGCTTCGATCCTTGCAGTGGAATGAATGTACTTAAGGTTTGCTGGATCAGCCAGAGCTCTGCTAATCAACGCGCTGGTCGTGCTGGGAGGACCGAGCCTGGTAGGTGCTATAGGCTGTACTCAGAAGCTGATTATCAATCTATGGAACTAAATCAAGATCCTGAGATACGAAGAGTTCATCTTGGCGTAGCAGTTTTGAAGATCCTTGCTTTAGGGGTGAAGAATGTGCAGGATTTCGATTTTGTGGATGCTCCGAGCCCTAGCTCTATTGGGAGGGCAATCAGGAATCTAATTCAATTAGGAGCCATTAAACTGAACAATAATGTTCATGAATTAACTTCTGAAGGTAGGTGCTTAGCAAGAATGGAGATTGAACCGAGGCTTGGTAAACTCATTCTTGGCTGTTTCCAATATGCTTTGGGCAGGGAAGGCATTGTCCTTGCTGTCATGATGGCCAATGCTAGAAGCGTATTTTGCAGAGTTGGTAATGAAGGTGATAAACAAAGATCTGATTGTCTCAAAGTGCAATTTTGCCATTGCGATGGCGACCTTTTTACTCTTCTGTCTGTGTACAAAGAATGGGAAGCTCTGCCTCAAGATATGAGGAATAAATGGTGTTGGGAAAACAGCATCAATGCGAAATCTATGAGGAGATGCCAAAACACCTTTTTGGAGTTAGAATCTTGCCTAGAGAGCGAACTTGGCTTTGTTGTTCCAAGCTACTGGCGCTGGGACCCTCACATCCCTTCTATTCATGATAAGAATATGAAAATAGCTATATTGTCCTCACTATCCGAAAATGTAGCCATGTACTCTGGACGCAATCAACTTGGTTACGAAGTAGCTCAAACTGGGCAACTTGTTCAACTACATCCATCATGTTCCTTGCTCATATTTGCCCAGAGGCCTAGTTGGGTGGTTTTTTATGAGCTCCGTTCAGAGTCTAATGAATATTTGTTCTGTGTGAGTGCTATTGACTTTCAATCATTATACAGCCTTAAAACTCCTCCCTTGTTTGATGTATCCAAGATGGAAGAGCGGAAGTTGCAAATGAGGACATTGTCTGGGTTTGGCAAACATGTTCTCAAGAGATTTTGTGGAAAAGGAAATTTGCTCGGTCATGTTTCTCGTATTAGGAAAGCTTGTATGGATGAACGAATCTTTGTTGAAGTGAATTTTGACGAGAACCAAGTTCAGTTGTATGCCAGTTCACATGATGTGAATGCAGCTAGTAAGTTGGTGAACGATGTTTTAGCATATGAGAAAAAGAGGTTATACAATGAATGTATGGAAAAATGTTTGTATCACGGGTCTGGTTCTTTATCACCCGTGGCTTTGTTTGGCTCTGGTGCTGAGATAAAGCATTTGGAGCTTGAGAAGCATTCGTTGAGTGTTGATGTGTTTCACCCAAATGTAAATACAATTGATGAAATGGAGCTCTTGATGTTTTTTGAGAAAAATACTTCTGGTTGTATATGTGACATGCACAAGTTCACAAGCATGGTGAAGGATGTTGAGGATAAAGAAAAATGGGGCAGGATAACATTTCTGACCCCCAATGCTGCCAAAAGAGCTGCCGAGCTGGATGGAGAAGAGTTTCGTAACTCGCCCTTGAAAATAGTTCCTTCACAATCAGCTATGGGAGATAAAACATTTTCATTTCCTGCAGTTGAAGCAAGAATTTCTTGGCCTCGTAGGCCTACCAGAGCAATTGGCATGGTTATATGTGATAAAAGTGATGTCAATTTCATCTTGAGAGATTTTAATAACCTTATAATAGATGATAGATATATTCGTTGTGCACCCAACGATAAATATATGGACAGAATTATGATAAGTGGGCTTGACAAAGAGCTTCCCGAGACTGAAATTTTGGATGTACTAAGATCTGCTACAAGTAGAAGGATTCAAGATTTTTTCTTTTTGAGGGGAGATGCTGTTGTAAATCCATCATGCAGTGTCATTGAAGAGGCACTCTTGAAAGAAATTTTACCCTTAATGCCCAAAAGGAACCCTCACATTAGTTCTTGCCGTGTTCAGGTGTTTCAACCTAAGCCGAAGGATTATTTGATGAGTGCTTTAATTCATTTTGATGGAAGATTACATTTAGAGGCAGCAAAAGCTTTGGAGAACATTGATGGAAAGGTGTTGCCTGGATGTCTTTCATGGCAGAAGATAAAGTCCCAGCAGTTGTTTCACAGCACCTTGATATTTTCTTCTCCAGTGTATCATGTGATTAAAGAACAACTGGAAAAAGTACTGGCAAGTTTCAAAAATTTAGAAGGTCTTCAATGGAACCTAGACAGGACACCTAATGGTTCCCACCGAGTTAAGATAACAGCCAGTGCCACAAAGACGGTGGCAGAAGGTAGGAGACCTCTGGAAGAACTATGGAGAGGGAAAACCATAGTCCACGATAACCTCACCCCTTCCGTTCTACAGCTCATGTTGTCCAAATATGGTTACAGTCTTACAAGCTCAATACAGCAGGCGACAACAACTTACATTCAATTTGACAGGCGCAACCTGAATATACGGATATTTGGTTCGCCAGACAAGATTGCTTTGGCTGAGCAGAAGTTAATTCAATCTCTCTTGTCCCTCCATGAAGAAAAGGAGTTAGTAATCCATCTGAGAGGGAGGGACCTACCTTCTGATTTAATGAAGCGAGTGGTTAAGAATTTCGGGCCAGATCTTCACGGACTAAAAGAGAAGGTACCTGGAGCAGATCTTAGGCTCAACACACGTGACCAGACAATCCTTCTTCATGGTAACAAGGAGTTCAAATCACGAGTAGAAGAAATAACTTTCGATATTGCACGCTTAAGTCATCAATTAATCGAGAAACTTGACATTGGACCTAGTTGTCCAATTTGCTTGTGTGAGGTTGATGATGGATATCAACTTGAAGGCTGTGGTCATTTGTTTTGCCGGTCGTGTATGGTGGAGCAGTGTGAATCTGCTATAAAAAACCAAGGCAGTTTCCCAATACGTTGTGCTCATCAGGGATGTGGAGATCTTATTTTGCTTGCAGATTTCAGAACTCTCCTATCAAATGATAAGTTGGAGGAACTTTTCAGGGCATCATTGGGAGCTTTTGTAGCATCAAGTTCAGGAACTTATAGGTTTTGCCCGTCTCCTGACTGCCCCTCAATCTATCGAGTTGCAGATCCCGACACTGCTAGCGTGCCATTTGTTTGTGGGGCATGTTATTCAGAGACTTGTACCAGGTGCCACTTAGAGTACCATCCATATGTTTCCTGTGAGAGATATCGAGAATTAAAGCATGACCCAGATTCATCATCTCTGAGGGATTGGTGCAAAGGGAAAGAACACGTCAAGTGGTGCTCGGCGTGCGGCCATGTAATTGAAAAGGTAGACGGGTGCAATCACATTGAGTGCAAGTGTGGAAAACATATCTGTTGGGTTTGCTTGGAGTTCTTTACAAGCAGTGTTGAATGTTACGAACACATGGACATACACGATAACTTTCCGGTTGCATTGAATTACAGGAAAAACAACCGTGAGCTGTTGCAGGTATTTCTTGAGAAAATTGAAGAAGTGAAAGAAAAGTATAGGCAAGTGCTAACCAAAGTCGCGCTCCTTCAAAGAGTATTCAATACTCCAGGATCTATTATAACCTTCAGCTGTCAATATGTCATCCTCAAGGACTATAGATTCAAATATGACACAAGTTCCATATCTAAGCTTGTTTTGCTGCATTTGCATGCAACCAAAATCCGAGCATCTATTGTTAATTGTTTAGAACAGAAACTCCGACTCCAAACAGGCGCCATGCAGTTGATACAGATGACGAGTATCAATGCATTTATGATTGTTAAGGTTGATACAGATGACGAGTATGAGTTTGCAGGCGACATGCAGGTTCAAGGATTGCCTACGGTTTTCTTTATTAGTCCTGATCCGAAAAAAGACGCTATTCGAACCGAAGGACTTGTACCAATACAGATGATGAGAGATATCATTGACAAAGAAATGTGA | 5709 | 0.4123 | MKKTFSTNSATRRDSYYHRQPPSPIFHHRNPRFHSNHRHLPTHPRHPTFTINLRFNHRIHRRDLCRDDIESLIKKCNPNPDNFTFNTNDSIAASLNFNQKTDAINAVVWFWQSRLSVNSNPIHDFTPEFIMNSDNVELDVRLRNVFVSHVKELMNGNEVNRWIEEWDRLLKEINHVNSLLSKSSPIRVQEQNIDRKKALDGEKSLIERRLKEFESAMECILKYLEEKNNLENGDYDYDYEVVNVFRFGEKFDWEKIYNLIVRERCRFEEGLPIYAYRREILQQLHHQKITVLIGETGSGKSTQIVQFLADSGLGANESIVCTQPRKIAAKSLAERVREECGGCYEDNSIKCYSTFSSWNKFDSRITFMTDHCLLQHYMSDKNLSGISCIIVDEAHERSINTDLLLALIKNLLCKRVEMRLIIMSATADAKQLSDYFYSCGIFRVLGRNFPVEVRYVPSDCGGRSGSAVVDSYVSDVVKMATEIHSTENEGTILAFLTSQLDVEWACEKFESRSAVALPLHGKLSSEEQFHVFRDYPGKRKVIFSTNVAETSLTIPGVKYVIDSGLVKDSRFDPCSGMNVLKVCWISQSSANQRAGRAGRTEPGRCYRLYSEADYQSMELNQDPEIRRVHLGVAVLKILALGVKNVQDFDFVDAPSPSSIGRAIRNLIQLGAIKLNNNVHELTSEGRCLARMEIEPRLGKLILGCFQYALGREGIVLAVMMANARSVFCRVGNEGDKQRSDCLKVQFCHCDGDLFTLLSVYKEWEALPQDMRNKWCWENSINAKSMRRCQNTFLELESCLESELGFVVPSYWRWDPHIPSIHDKNMKIAILSSLSENVAMYSGRNQLGYEVAQTGQLVQLHPSCSLLIFAQRPSWVVFYELRSESNEYLFCVSAIDFQSLYSLKTPPLFDVSKMEERKLQMRTLSGFGKHVLKRFCGKGNLLGHVSRIRKACMDERIFVEVNFDENQVQLYASSHDVNAASKLVNDVLAYEKKRLYNECMEKCLYHGSGSLSPVALFGSGAEIKHLELEKHSLSVDVFHPNVNTIDEMELLMFFEKNTSGCICDMHKFTSMVKDVEDKEKWGRITFLTPNAAKRAAELDGEEFRNSPLKIVPSQSAMGDKTFSFPAVEARISWPRRPTRAIGMVICDKSDVNFILRDFNNLIIDDRYIRCAPNDKYMDRIMISGLDKELPETEILDVLRSATSRRIQDFFFLRGDAVVNPSCSVIEEALLKEILPLMPKRNPHISSCRVQVFQPKPKDYLMSALIHFDGRLHLEAAKALENIDGKVLPGCLSWQKIKSQQLFHSTLIFSSPVYHVIKEQLEKVLASFKNLEGLQWNLDRTPNGSHRVKITASATKTVAEGRRPLEELWRGKTIVHDNLTPSVLQLMLSKYGYSLTSSIQQATTTYIQFDRRNLNIRIFGSPDKIALAEQKLIQSLLSLHEEKELVIHLRGRDLPSDLMKRVVKNFGPDLHGLKEKVPGADLRLNTRDQTILLHGNKEFKSRVEEITFDIARLSHQLIEKLDIGPSCPICLCEVDDGYQLEGCGHLFCRSCMVEQCESAIKNQGSFPIRCAHQGCGDLILLADFRTLLSNDKLEELFRASLGAFVASSSGTYRFCPSPDCPSIYRVADPDTASVPFVCGACYSETCTRCHLEYHPYVSCERYRELKHDPDSSSLRDWCKGKEHVKWCSACGHVIEKVDGCNHIECKCGKHICWVCLEFFTSSVECYEHMDIHDNFPVALNYRKNNRELLQVFLEKIEEVKEKYRQVLTKVALLQRVFNTPGSIITFSCQYVILKDYRFKYDTSSISKLVLLHLHATKIRASIVNCLEQKLRLQTGAMQLIQMTSINAFMIVKVDTDDEYEFAGDMQVQGLPTVFFISPDPKKDAIRTEGLVPIQMMRDIIDKEM | 1902 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre6g00282 | 1902 | Gene3D | - | 1653 | 1864 | - | - | |
| Trre6g00282 | 1902 | Pfam | DEAD/DEAH box helicase | 277 | 432 | IPR011545 | GO:0003676|GO:0005524 | |
| Trre6g00282 | 1902 | FunFam | RBR-type E3 ubiquitin transferase | 644 | 750 | - | - | |
| Trre6g00282 | 1902 | Pfam | Helicase conserved C-terminal domain | 483 | 600 | IPR001650 | - | |
| Trre6g00282 | 1902 | Gene3D | - | 645 | 749 | - | - | |
| Trre6g00282 | 1902 | PANTHER | ATP-DEPENDENT RNA HELICASE | 265 | 907 | - | - | |
| Trre6g00282 | 1902 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Trre6g00282 | 1902 | Gene3D | - | 258 | 447 | IPR027417 | - | |
| Trre6g00282 | 1902 | SUPERFAMILY | RING/U-box | 1524 | 1600 | - | - | |
| Trre6g00282 | 1902 | SUPERFAMILY | RING/U-box | 1607 | 1663 | - | - |
Showing 1 to 10 of 39 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre6g00282 | K12818 | - | gmx:100810008 | 2465.26 |
Showing 1 to 1 of 1 entries