Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00279 ATGCCTTCCAAAACTCACCAAAACGAAATCGAAGAAAAATCACCGTACAAAATAGAACAAGAAGAAGACGATGACGAAGAACAAGAAGTATGGGATGATTGGGAAGGAGACGAAGGAGATTCTGAATTCATCTGTCTCTTCTGTGATTCCAATTACACTTCCTGCACTTCTTTGTTCCAACATTGTTCTTCAATTCACCACTTCGATTTTCATACTGTTACAAATTCTCTTCATTTGGATTTCTATGCTTCCTTCAAGCTCATTAATTACATTCGCTCTCAGGTGGCGGAGAGCAGATGTTGGAGTTGTGGGTTAGCTTGTCAGTCCAAACATGATTTGCAGAATCACTTGCATGATGTAACTGACTTTAGTAGTATTAAGCCTTTGTGGGATGATGATAGATATCTAAAACCTTTCATGCAAGATGATTCATTACTGTACAACTTTGGTGAATTTGAAGAAGGTGAAGATGAACAAACTTCAGTCATGGATGAAGATCTTGTTAGGGATTTGAAGAACGCAATTTATGGTGATGATCAAGATGCCTTGAAAAAATTGGTAGTCAATGAGACAGCTTCTGTTTCAGATGATCAGTCAAGCTCGCCTAGTTCTTCAGATAAGGAACTTGTTAATGGGAAGGACTCAAGAGGATGTATTTTGTCAATTGATAAGGATCCGGAAGAAGGGTCTTTGATGGGTAATCCTCAGAATCACATTGTAACACATATTAGGAAGGTCAATGAAAGTTATTTTGGGTCTTACAGTTCATTTGGCATCCATCGGGAGATGTTAAGTGATAAGGCTAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCCTCTCTGCTAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGCATCCTCAGCCTTTTTTCAGCTCAAGCAGGGGCTTCAAGGGTCATTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCAACTCAGGTTGCAAAAAATAACGGTCTTTTGTTGAGTAAAAGTGAAACTAGAGTCAATGGCAACAACAAAGGAGTCGTAGAAGTGGTTCATGGCATGGTTGAAGAAATTGATAAAATTGTTGAACTTCAACCTCACAGTGTTGATGTATTGTTAAGTGAATGGATGGGGTATTGCTTGTTGTATGAATCTATGCTTGGTTCAGTGCTTTATGCACGTGACCGGTATTTGAAGCCTGGGGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAACGTGTGTGATTTTGACATGTCTTGCATTGGGGAGGAACTTGTCATAGACGCTGCCCGATATCCTATAGTTGATGTCATAGACCATCAAGATTTAGTTACCAGTTCTTCTATTCTTCAGACCTTTGACTTGGCTACCATGAAGCCCCATGAAGTGGATTTCACTGCAACAGCTTCTTTGGAGCCAAAATTGAGTGCTTCAGAAAACGAAAAAACACATTTGAATTCTAAAACAAGTTGGTGTTATGGAGTTGTCTTATGGTTTGATACTGGGTTTACAACTAGATTCTGCCGGGAAACACCAACTGTGCTGTCAACATCTCCTTACACTCCAAAAACACATTGGTCACAAACAATATTAACATTTCGGGAACCCATTGCCATGGGATTGGGCGTAGAAAATGGGGGAAATTCGGAAACGATAGGCACAGAAGCCTACCCTGCTGTGAAGATTGATTTGCGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATCGACATTTCCATGGAAGCTGCTGGTGTTGGTCCCGATGGTCGGAGACGCAGTTGGCCAGCTCAACTTTTTTCATTGCAGTAG 1866 0.4137 MPSKTHQNEIEEKSPYKIEQEEDDDEEQEVWDDWEGDEGDSEFICLFCDSNYTSCTSLFQHCSSIHHFDFHTVTNSLHLDFYASFKLINYIRSQVAESRCWSCGLACQSKHDLQNHLHDVTDFSSIKPLWDDDRYLKPFMQDDSLLYNFGEFEEGEDEQTSVMDEDLVRDLKNAIYGDDQDALKKLVVNETASVSDDQSSSPSSSDKELVNGKDSRGCILSIDKDPEEGSLMGNPQNHIVTHIRKVNESYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFSAQAGASRVIAVEASAKMAAVATQVAKNNGLLLSKSETRVNGNNKGVVEVVHGMVEEIDKIVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRYLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCDFDMSCIGEELVIDAARYPIVDVIDHQDLVTSSSILQTFDLATMKPHEVDFTATASLEPKLSASENEKTHLNSKTSWCYGVVLWFDTGFTTRFCRETPTVLSTSPYTPKTHWSQTILTFREPIAMGLGVENGGNSETIGTEAYPAVKIDLRVSIVRSTEHRSIDISMEAAGVGPDGRRRSWPAQLFSLQ 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00279 621 MobiDBLite consensus disorder prediction 192 212 - -
Trre6g00279 621 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 253 557 IPR029063 -
Trre6g00279 621 Gene3D - 411 613 - -
Trre6g00279 621 CDD AdoMet_MTases 289 407 - -
Trre6g00279 621 MobiDBLite consensus disorder prediction 1 17 - -
Trre6g00279 621 Gene3D Vaccinia Virus protein VP39 239 408 IPR029063 -
Trre6g00279 621 MobiDBLite consensus disorder prediction 1 32 - -
Trre6g00279 621 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 46 603 IPR025799 GO:0016274|GO:0018216
Trre6g00279 621 MobiDBLite consensus disorder prediction 18 32 - -
Trre6g00279 621 Pfam C2H2 type zinc-finger (2 copies) 45 119 IPR041661 -
Trre6g00279 621 MobiDBLite consensus disorder prediction 192 208 - -
Trre6g00279 621 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 247 573 IPR025799 GO:0016274|GO:0018216
Trre6g00279 621 FunFam Protein arginine N-methyltransferase 6 243 408 - -
Trre6g00279 621 Pfam Methyltransferase domain 289 404 IPR041698 -
Trre6g00279 621 SUPERFAMILY beta-beta-alpha zinc fingers 27 159 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00279 Trre-Chr6 1994575 1998595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00279 19 620 C2H2 Transcription Factor Family AT3G12270 54.961 0.0 649