Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00274 ATGAATCAAAGTTCTAAGATGAAAGAAAAAGTCTATGACTTTTACCCTACGGACTTCAATAGTGATGAACGTGAAGTAGCTTCCATTCTTCTTCAATGGCCAAAGCTACATATAGCCCAAGTAATGGAGAAGAGAAGAAAATTGAAAATAACTCTTGCAGGAAAACGGATTTCAAAAATTCGTGAAGAAACTTATAATGACAGTAATGTTCATCCGGTGCCGCAAATTAATATTCCCGATGTTGTAAAGGAAAATCTAAACAACCCTCTAGATATACCGACGATTCCTGGCGTACCAAATAATAATATTCCTGATGTTGTTATGGAAAATGTAAACAACCCTCCTCTAGATATACCGACGATTCCTGGCGTACCAAATAATAATATTCCTGATGTTGTTATGGAAAATGTAAACAACCCTCCTCTAGATATACCGACGATTCCTGGCGTACCAAATAATAATATACTTCAATGTTGCAAGCCTTTTGTGAAAAAACTATCAAAGAGTGATTTGAAGGTGGATCAAAATAGATTGTTTATGAACAAGGCTCATGTGGAAAAGTATTTCATACCCTTATTGAGAAAAGGTGAAGAAAAAATTGTAGATGGAATAAACGTGATTGCATATGACATGCAAGGTAGACAGTTCAACATGAAGTTCATACTTTGGAGTGAAAAATTTTATGTCCTCAATGGATCTGGGTGGAGGAATTTCTTTGAAAAACATTCTTTGCAAGCGAATCAAGATCATGTTAAACATAATAAGAGAGTGAACTTAAAATTAGGGGAGGGAGGGGTTCAGATTGAGGTATTGGCTGCTGTTTGA 825 0.3564 MNQSSKMKEKVYDFYPTDFNSDEREVASILLQWPKLHIAQVMEKRRKLKITLAGKRISKIREETYNDSNVHPVPQINIPDVVKENLNNPLDIPTIPGVPNNNIPDVVMENVNNPPLDIPTIPGVPNNNIPDVVMENVNNPPLDIPTIPGVPNNNILQCCKPFVKKLSKSDLKVDQNRLFMNKAHVEKYFIPLLRKGEEKIVDGINVIAYDMQGRQFNMKFILWSEKFYVLNGSGWRNFFEKHSLQANQDHVKHNKRVNLKLGEGGVQIEVLAAV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00274 274 PANTHER OS05G0237600 PROTEIN 164 252 - -
Trre6g00274 274 CDD B3_DNA 162 247 IPR003340 GO:0003677
Trre6g00274 274 SUPERFAMILY DNA-binding pseudobarrel domain 162 247 IPR015300 -
Trre6g00274 274 Gene3D - 149 257 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00274 Trre-Chr6 1981121 1982563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00274 133 260 B3 DNA Binding Superfamily AT1G20600 31.783 7.27e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00274 - - tpra:123915381 183.726