Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00256 ATGGCATCAATGTCAGCATCTGGTTCATGGAGTTTTAAGGACAACAAAGCTTTTGAAAGGGCATTAGCTGTTTTTGATAAGGACACACCTGATCGTTGGTCCAATGTTGCTCAAGCTATTGGTGGAGGGAAGACTCCTGAAGATGTTAAGAGACACTATGAACTTCTTCTTAGGGATATTAGGCACATTGAATCAGGTCAAGTTCCATTTCCAAATTACAAGAATGTTGGAAGCTTTGATGAGGAGAAAAGGATGAGAAACCTGAAGCTCAAGTGA 276 0.4058 MASMSASGSWSFKDNKAFERALAVFDKDTPDRWSNVAQAIGGGKTPEDVKRHYELLLRDIRHIESGQVPFPNYKNVGSFDEEKRMRNLKLK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00256 91 CDD SANT 9 57 IPR001005 -
Trre6g00256 91 SMART sant 6 59 IPR001005 -
Trre6g00256 91 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
Trre6g00256 91 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Trre6g00256 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 81 IPR044636 GO:0003700
Trre6g00256 91 Gene3D - 2 70 - -
Trre6g00256 91 FunFam Transcription factor SRM1 2 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00256 Trre-Chr6 1869947 1870898 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre6g00256 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00256 - - gmx:100804396 150.984