Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00246 ATGGCGCAAGATAATAAAAAGCTGGTGGATGAAGTATCCGGTTGGCTTAGAGTCTATGATGATGGTTCGGTGGACCGGACATGGACCGGACCACCCGAGGTCAAATTCATGATTGAACCGGTTGCTCCCCATGAACAATTTATCGAAGGAGTTGCCACTCGTGACGTGACAACCTCCATGACTACTACTAATGATGGTTCCATCCATCGCGCTCGGTTGTATCTACCGGAGAAAACACCCAAGGACAATATAAAATTGCCCATACTCATGCACTTCCATGGTGGCGGTTTTTGCATTACCGAACCAGATTCGTTCATGTACTACCATGTGTATACCCAGATCGTCCGATGTACTCGTTCTATTTGTGTCTCTCCTTTCCTCCGACGAGCACCAGAGCACCGTCTTCCTACTGCCATTGATGACGGGTTTGCAACACTCAAGTGGCTTCAATCAGTTGCAAGGGGAGACGCCCGTGACACTTGGCTTGAGGAATATGGTGACTTCGACAAAGTTTTCCTCATAGGAGATAGCTCGGGAGGAAATTTAGTCCACGAAGTAGCAGCTAGAGCCGGTTCGGACGACTTGAGCCCAGTTCGACTTGCAGGAGCAATTCCAATCCATCCTGGGTTTGTCAGATCAATCCGAAGCCGGTCTGAAATTGAAATGCCACAATCACCATTTCTAACATTGGAAATGCTGGACAAATTTTTGAGTTTGGCACTACCAATTGGAAGCAGCAAGGACCACCCCTTCACATGTTCGATGGGCACGGCCGCGCCACCCATTGACGGTCTAAAACTGCCGCCATTTCTTTTATGTGTAGCTGAAAAAGACTTAATGAGAGATACAGAAATGGAGTACTATGAAGCCATGAAGAAGGCAAATAAAGAAGTGGACTTGTTTGTGAGCAAGGGAATGACACATTGTTTCTATCTCAACAAGATTGCTGTGGATCTGGACTCCGCCGTTAGATCCCAGATGGATGCACTCATTGGGAGGGTAAAGGAATTCATTGAGAAGCATTAA 1026 0.4698 MAQDNKKLVDEVSGWLRVYDDGSVDRTWTGPPEVKFMIEPVAPHEQFIEGVATRDVTTSMTTTNDGSIHRARLYLPEKTPKDNIKLPILMHFHGGGFCITEPDSFMYYHVYTQIVRCTRSICVSPFLRRAPEHRLPTAIDDGFATLKWLQSVARGDARDTWLEEYGDFDKVFLIGDSSGGNLVHEVAARAGSDDLSPVRLAGAIPIHPGFVRSIRSRSEIEMPQSPFLTLEMLDKFLSLALPIGSSKDHPFTCSMGTAAPPIDGLKLPPFLLCVAEKDLMRDTEMEYYEAMKKANKEVDLFVSKGMTHCFYLNKIAVDLDSAVRSQMDALIGRVKEFIEKH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00246 341 SUPERFAMILY alpha/beta-Hydrolases 8 340 IPR029058 -
Trre6g00246 341 Gene3D alpha/beta hydrolase 7 339 IPR029058 -
Trre6g00246 341 Pfam alpha/beta hydrolase fold 89 311 IPR013094 GO:0016787
Trre6g00246 341 PANTHER ARYLACETAMIDE DEACETYLASE 10 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00246 Trre-Chr6 1790586 1791611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00246 8 339 Carbohydrate Esterase AT5G16080 31.858 6.31e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00246 - - lja:Lj0g3v0229819.1 547.354