Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00243 ATGGTGCAAGATAAAAAGCTGGTGGATGAAGTATCTGGTTGGCTTAGAGTCTATGATGATGGTTCGGTGGACCGGACATGGACCGGACCACCCGAGATCAAATTCATGATTGAATCGGTTGCTCCCCATGAACAATTTATCGAAGGAGTTGCCACTCGTGACGTGACAACCTCCATGACTACTACCAATGATGGTTCCACCCATCGCGCTCGGTTGTATCTACCGGAGAAAATACCCAAGGACAATATAAAACTGCCCATACTCATGCACTTCCATGGTGGCGGTTTTTGCATCACCGAACCAGATTCGTTCATGTACTACCATGTGTATACCCAGTTCGTCCGATGTACTCGTTCTATTTGTGTCTCTCCTTTCCTCCGACGAGCACCAGAGCACCGTCTTCCTGCTGCCATTGCTGACGGGTTTGCAGCACTCAAGTGGCTTCAATCAGTTGCCAGGGGAGACGCCCGTGACACGTGGCTTGAGGAATATGGTGACTTTGACAAAGTTTTCCTCATAGGAGATAGCTCCGGAGGAAATTTAGTCCATGAAGTAGCAGCTAGAGCCGGTTCGGCCGACTTGAGCCCAATTCGACTTGCAGGAGCAATTCCAATCCATCCTGGATTTGTCAGGTCAATCCGAAGCCGGTATGAAATTGAAATGCCACAATCACCGTTTCTAACATTGGAAATGGTAGACAAATTTTTGAGTTTGGCACTACCAATTGGAAGCAGCAAGGACCACCCCTTCACATGTCCGATGGGCACGGCCGCGCCATCCATTATAGGCCTAAAACTGCCGCCATTTCTTTTATGTGTAGCTGAAAAAGACTTGATGAGAGATACAGAAATGGAGTACTATGAAGCCATGAAGAAGGCAAATAAAGAAGTGGACTTGTTTGTGAGCAAGGGAATGACACATTGTTTCTATCTCAACAAGATTGCTGTGGATCTGGACTCCACCGTTAGATCCCAGATGGATGCACTCATTTGGAGGGATTGGTTGCCACGAGTAGTTTTGAAACTCAATTTCAGAAAAAATGCTTAA 1047 0.468 MVQDKKLVDEVSGWLRVYDDGSVDRTWTGPPEIKFMIESVAPHEQFIEGVATRDVTTSMTTTNDGSTHRARLYLPEKIPKDNIKLPILMHFHGGGFCITEPDSFMYYHVYTQFVRCTRSICVSPFLRRAPEHRLPAAIADGFAALKWLQSVARGDARDTWLEEYGDFDKVFLIGDSSGGNLVHEVAARAGSADLSPIRLAGAIPIHPGFVRSIRSRYEIEMPQSPFLTLEMVDKFLSLALPIGSSKDHPFTCPMGTAAPSIIGLKLPPFLLCVAEKDLMRDTEMEYYEAMKKANKEVDLFVSKGMTHCFYLNKIAVDLDSTVRSQMDALIWRDWLPRVVLKLNFRKNA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00243 348 Pfam alpha/beta hydrolase fold 88 310 IPR013094 GO:0016787
Trre6g00243 348 Gene3D alpha/beta hydrolase 7 323 IPR029058 -
Trre6g00243 348 PANTHER ARYLACETAMIDE DEACETYLASE 9 311 - -
Trre6g00243 348 SUPERFAMILY alpha/beta-Hydrolases 6 314 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00243 Trre-Chr6 1771880 1773986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00243 7 332 Carbohydrate Esterase AT5G16080 31.832 3.52e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00243 - - lja:Lj0g3v0229819.1 521.931