Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00241 ATGGTGCAAGAGAAGAAGGTGGTGGATGAAGTGTCTGGTTGGCTTAGAATCTATGACGACGGTTCGGTAGACCGGACATGGATGGGACCACCTGAGGTCGAATTCATGATTGAACCGGTTGCTTCCCATGAACAATTCATTGAAGGAGTTGCCATTCGTGATGTGACAACCACCATGGCCAACATCAATGACGGTTCCATCCACCGCACTCGGCTATACCTGCCGAAAAAAACACCTAAGGACAACCAAAAACTACCCATACTCATCCATTTTCACGGCGGTGGTTTCTGCATTAGCGAACCAAATTGGTTCATGTACTATCATGTGTACACCCAATTCGTCCGCGACACTCGATCTATTTGTGTGTCTCCGTTCCTCCGACGAGCACCAGAACACCGTCTTCCTGCTGCCATTGAGGACGGATTTGCAACTCTCCAGTGGCTCCAATCAGTTGCCAAGGGAGACGCTCGTGACCCATGGCTTGAGGAACACGGGGACTTCAACAAAATTTTCCTCATTGGAGATAGCTCTGGAGGAAACTTAGTCCACGAAGTAGCAGCTAGAGCCAGTTCGGTCGACCTGAGTCCAATTCGGCTTGCTGGAGCAATTCCGATCCATCCTGGATTTGTTAGGTCAGAACGAAGTCGATCCGAAACTGAAATGCCACAATCACCATTTCTGACATTGGACATGTTGGACAAATTTTTGAGTTTGGCACTACCACTTGGGAGCAACAAGGATCACCCCTTCACATGCCCGATGGGCGCGGGCGCGCCACCCCTTGACAGCCTAAAATTGCCGCCATTTCTTCTATGTGTAGCTGAAAAAGACTTGTTGTGGGATACAGAAATGGAGTACTATGAAGCAATGAAAAAGGCCAATAAAGAAGTGGACTTGTTTGTGAGCAAGGCAATGACGCATAGTTTCTATCTCAACAAGATTGCCGTAGATATGGACCCTACTGTTAGATCTCAAATGGATGCACTCATTGGTAGGGTTAAGGAATTCATTGAGAAGCATTAA 1023 0.4761 MVQEKKVVDEVSGWLRIYDDGSVDRTWMGPPEVEFMIEPVASHEQFIEGVAIRDVTTTMANINDGSIHRTRLYLPKKTPKDNQKLPILIHFHGGGFCISEPNWFMYYHVYTQFVRDTRSICVSPFLRRAPEHRLPAAIEDGFATLQWLQSVAKGDARDPWLEEHGDFNKIFLIGDSSGGNLVHEVAARASSVDLSPIRLAGAIPIHPGFVRSERSRSETEMPQSPFLTLDMLDKFLSLALPLGSNKDHPFTCPMGAGAPPLDSLKLPPFLLCVAEKDLLWDTEMEYYEAMKKANKEVDLFVSKAMTHSFYLNKIAVDMDPTVRSQMDALIGRVKEFIEKH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00241 340 Pfam alpha/beta hydrolase fold 88 310 IPR013094 GO:0016787
Trre6g00241 340 Gene3D alpha/beta hydrolase 5 338 IPR029058 -
Trre6g00241 340 PANTHER ARYLACETAMIDE DEACETYLASE 9 311 - -
Trre6g00241 340 SUPERFAMILY alpha/beta-Hydrolases 5 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00241 Trre-Chr6 1754533 1755555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00241 7 330 Carbohydrate Esterase AT1G68620 33.837 4.42e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00241 - - lja:Lj0g3v0229819.1 557.37