Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00236 ATGATTAGTGAGAAAATGAATGATTCAGCATGTTTCACAGATTCATCTTCATTTTCTGTTCCAAATACTTTCATTGGTCTTCTACTACTTAACTTCAAAATCAGATCTTCTTCTTCATGTAACAACAACAACAACAACACTCTTCTCTTTACACCTTCTCAGCTTCTTAGAGATTTTGCCATAAGAGAATTCAATGCTTTTCTTTGGATTTTTCTTCTTGTTATCACTACCCTTTTGGTTAAAAGACTCTTTAATATCTTCACTTTGTTGTATAAAGCTAAACAAATACCTGGACCTCCATCATCATCATTTTTTGGACACTACAAACTCCTCTCCAAACAAAATTTCAATGATGTGTTGTCAGAATCCCATGAGAAGTATGGTCCAATTGTTAAGCTATGGTTAGGCCCTACTAAGCTTCTGGTGTCAGTTAAGGATCCAGTGCTGATTCAAGAGATGCTTATACAGGCTGAGGATAAATTACCTTTTACTGGAAAAGCCTTTCATCTTGCCTTTGGGGAATCAAGCCTTTTTGCTCCTTCCTATGAAAAGGTCCAAAAGAGAAGGGAGTTATTGGCAACAGAATTGAATGAAAGATTAATGACGACTGCTGATCTGAATCCTCTGGAAGTTGCAGACTTTATCATAGATCAAATAGAAAACATCAAAGGCAGAGGAAGCATTGGTTGCGAGTTAGTTTCTCAGCATATGGCTTTCACATTAATGGGGGCGACATTCTTTGGAGATGGCTTCTTGGCTTGGCCGAAGGCTTCAGTATACGAGGAACTTCTAATGATGATTGCTAATGATGCTTGTTTTTGGGCTTCCTATAATGTTACTCCATTTTGGAAACAAGGATTTTGGAGGTATCAACACTTATGTACAAAGTTAAGATGCTTAACTCAAGACATCCTTCAACATTGCAGACAGAGCTGCGTTCATAGCGAGAGTTCCAAGCTGGAAATGAAATCAGCAGATAGTGCACAATACAGCTCTAATGACAGTTTCCAAAATTACCATTTCTTTCGTGACCATAATGATCAGCAAAATTCTAAGGAAGAACCTTACGGGAACATCATGCGTGTGATGCTTCATGGATGTCAAACTACAGGTTCTTTGATTGCCAATGTATTGACTAATCTTGCCGTGCATCTGGAAATTCAGAACAAGGTTTATTCAGAGATTAGCATGGTTGGGAAAAACCCATCAAAATATGAGCATGAAGAAGTTTATAGGATGCCATTGCTGTTGGCTACAATTTATGAATCTGCACGCCTTCTCCCCACCAGTGCCATGCTGCAGAGGTGTTCTACAAAACACGACGTGAGATTTGCAACTGGTGTAACCATACCTGCTGGAGCTGTAATGGTTGTGCCTCTTCAACTGGTACAGAAGGATGGCTTCAATTGGGGGAAAGATGCAAGTGATTTTAATCCATACCGATTTTTGTCAAACATTACAAAAGGATCAGGTTCTGAAGACCAGCTTGATTATGGAATCAGCTCGTTTGTACTAAACGATCCAAGTGAAATTGCAGCCTTTCTTCCTTTTGGATCTGGCGCACGTGCATGCGTTGGGCAGAAATTTGTTATCCAAGTTGTTGCCACATTGCTGGCATCATTACTCAAGAAATATGAGATAAGGCTCAACACAGGCTCAGATGGTGACTCTGAACAAATCTTGAAAAATCATCTTCTCCAGCATCACCCTAATTCACAAATACTGTTTGTGAGAAGGGACCAGTGA 1746 0.3946 MISEKMNDSACFTDSSSFSVPNTFIGLLLLNFKIRSSSSCNNNNNNTLLFTPSQLLRDFAIREFNAFLWIFLLVITTLLVKRLFNIFTLLYKAKQIPGPPSSSFFGHYKLLSKQNFNDVLSESHEKYGPIVKLWLGPTKLLVSVKDPVLIQEMLIQAEDKLPFTGKAFHLAFGESSLFAPSYEKVQKRRELLATELNERLMTTADLNPLEVADFIIDQIENIKGRGSIGCELVSQHMAFTLMGATFFGDGFLAWPKASVYEELLMMIANDACFWASYNVTPFWKQGFWRYQHLCTKLRCLTQDILQHCRQSCVHSESSKLEMKSADSAQYSSNDSFQNYHFFRDHNDQQNSKEEPYGNIMRVMLHGCQTTGSLIANVLTNLAVHLEIQNKVYSEISMVGKNPSKYEHEEVYRMPLLLATIYESARLLPTSAMLQRCSTKHDVRFATGVTIPAGAVMVVPLQLVQKDGFNWGKDASDFNPYRFLSNITKGSGSEDQLDYGISSFVLNDPSEIAAFLPFGSGARACVGQKFVIQVVATLLASLLKKYEIRLNTGSDGDSEQILKNHLLQHHPNSQILFVRRDQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00236 581 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS P450 superfamily signature 365 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS P450 superfamily signature 515 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 CDD cytochrome_P450 128 556 - -
Trre6g00236 581 PANTHER CYTOCHROME P450 FAMILY 4 70 562 - -
Trre6g00236 581 Pfam Cytochrome P450 97 575 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506|GO:0016705
Trre6g00236 581 Gene3D Cytochrome P450 92 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS E-class P450 group I signature 124 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 PRINTS E-class P450 group I signature 374 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00236 581 SUPERFAMILY Cytochrome P450 93 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00236 Trre-Chr6 1717231 1721996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00236 97 559 Cytochrome P450 AT5G25140 23.909 9.21e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00236 - - psat:127085922 863.988