Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00235 ATGGCAGAAGATGCAGTGTCTTCAGTTTTGCAAGAACTCTACAAATTTGTTTTAGAAGAAGGAACTTTACTGACAGGGGTCGAGAAAGACTTCATTGACATCAGAGATGATCTTGAGATCATCCGAGCTTTCCTCAAGGATGCAGATAGAATGGCAGCAGATGAAGGAGAAGGAGAAGGAACCAATGAAGGAGTCAAAACATGGGTGAAGCAGCTGAGAGAAGCATCTTTTCGCATAGAAGATGTCATTGATGAGTATAACATGTATGTGGCACCGGCACCAAAGGTCAACCATTCTGGATTCATAGCCACAATCCAAATGATTCCTAACATGATCAAAAGCATGAATTGGCGCTACAAGATCGCTTCTGAAATTCAAGATATCAAGTCCTCACTTGGTAAAATCAAAGAAAGAAGTAGAAGGTTTAAACTTCAATCTGAAAGTAGATCAGGAAGCTCCCGAGGGACTAAAGCTCCTAGAATTGGTGACCCTCGAATGGCTCCTTATTTCATCGAAGAGACTCAAGTTGTGGGGTTTGAGTATGCACGAGATGAATTGGTTAGTTGCTTGGTGGATGGAAACAATGAGCTCATGTTGGTTTCTGTGGTTGGCATGGGAGGACTCGGTAAAACCACTCTCGCTAAGCATGTTTTTGATGATCTGTCGGTGAAAAGGCACTTTGATTGTCGCTCTTTCATAACAGTTTCTCAATCATACACTATGAGGGAGTTGTTGACAGAAATGATAAAGAAGTTTTGCAAGGACGCCAATGAGCCTATTCCGAAGGGTCTGCAGAAGATGGATGACCAAACATTGATTACTCAAGTGAGAGAATACCTTGAGTCAAAAAGGTACTTGGTTTTATTTGATGATGTTTGGAAAGAAAATTTTTCTGATGAGATTGTACATGCCTTAATTAGTAATAACAAAGGAAGTAGAATCATTGTGACCACTAGAATGATGCATGTAGCTGAATATTTTAAGAAATCTTATACTGTTCATGTTCACAAGCTACAACCTTTGCCTGAAGACAAAGCATATGAACTGTTTTGCAAGAAGGTGTTTAGAGGGCAATGTCCAACAGAACTTGAGGAGATGTCCCATGAAATTGTTCAAAAATGTGGAGGGCTACCACTGGCAATTGTAGCCATTGGAGGTCTTTTGTCAACAAAACCTCAAACCATGTTTGAGTGGAGAAAGCTGTGTCAAAATCTCCGAATGGAGTTAGAGCGCAATGTCCATTTGACCGATCTAATGAAGATTTTATCTCTTAGTTATGATGATTTGCCTCACCATTTGAAATCATGCATGCTATATTTTGGTATATATCCTGAAGACTACACCATCAATCGGAAGAGACTTACTAGGCAATGGATGGCTGAAGGGTTTGTTAAGAATGAGGAGATAAGACCATTGGAGGAAGTTGCTGAAGAGTACCTGATAGAGTTGATACAAAGAAGTTTGGTTCATGTTTCCAAAGTTGGCTTTGATGGGAAAGTCAAAATTTGTCAAGTCCATGATGTGTTGCGTGAAGTGATCATTAGAAAAATGAAGGACTTATGCTTTTGCCATTTAATGCATAAAGTTGACGAACAAGTCACTGTTGGAGTAACTCGACGCTTTTCTATAGCAGCTTTCTCCAACAGTGACTTGAGGAACTCGGGAACTCGTGCTATATTTATTTTTGACAAAGTTGAATTGCCCAAAGAGTTCATGGATGGTTTATCTGCCAAGTTCAAGCTTTTGAAAGTACTTGACTTTGAGAATTCTTTGTTGAATTATGTTCCTGATAACTTGGGGAATCTTTTCCACCTAAGATACTTGAACCTGAGTCATACAAAAGTTACAGTTCTTCCGAAATCCATCGGTATGCTAGTCAACTTAGAAACCTTGGATCTAAGGCAAACTCGAGTGCATGAGTTACCAAAAGAGATAAACAACCTCACAAAACTAAGGCTTCTTCCAGCTTATTATAGAAAATACGAAGGGAATTATTCTATGTTGAACTTTACAGATGGAGTGAAAATGCAAAAAGGTATTGGAGGCTTGATATCTTTACAAAAACTTTACTTTTTGGAAGCAGATCGTAGTGGAATAGACCTTATCGAAGAGCTCGAAAAGTTGACACAGTTAAGGAAGTTAGGCATAAAGCATGTGCGGCAAGGACATGCAAATGCTCTATGTGCTGCAATACAGGCGATGAAACACCTTGAATCTCTAAATATTGGTGCTATAGCTAAGGATGAAATTCTTGACTTGGATCTTGTATCAGCTCCGTCCCATCTTAGAGTGCTCAATTTGAAATGTAGACTAACAAAGTTGCCTAAATGGATTCCAAATCTTGAGTATCTTGTGAAGCTAAGACTTGGTTTATCTAAATTTGAAGATGATCCATTAGACTCTTTGATGAACTTGCCGAGTTTGTTGAGGCTGAATTTGTGGGATGACGCCTTTTATGGTGAAAAATTGCATTTTCGGAAAGGAGGGTTTCATAAGCTGAAGGAGTTAGATCTCACTAGATTGAATAAACTCAGTTCTGTATCTATAGACGAAAAAGCTTTGCCTGGTCTCGAACACTTCAGGTTTAACAACAATCCTCAATTGAAGGTGTTACCTCGAGACCTCAAAAACTTGGAAAAACTTCAATTCCTTGGATTTGCCGATATGCCAGCTGAAAATGGGGACCAAAGTTTCATGACTATGAGTTGCGCCCGATTCCTACTAAACTCAATATATGAAATATCAAGATTCAAATTCTCCTGGTTGCAGCTGACATGA 2778 0.3916 MAEDAVSSVLQELYKFVLEEGTLLTGVEKDFIDIRDDLEIIRAFLKDADRMAADEGEGEGTNEGVKTWVKQLREASFRIEDVIDEYNMYVAPAPKVNHSGFIATIQMIPNMIKSMNWRYKIASEIQDIKSSLGKIKERSRRFKLQSESRSGSSRGTKAPRIGDPRMAPYFIEETQVVGFEYARDELVSCLVDGNNELMLVSVVGMGGLGKTTLAKHVFDDLSVKRHFDCRSFITVSQSYTMRELLTEMIKKFCKDANEPIPKGLQKMDDQTLITQVREYLESKRYLVLFDDVWKENFSDEIVHALISNNKGSRIIVTTRMMHVAEYFKKSYTVHVHKLQPLPEDKAYELFCKKVFRGQCPTELEEMSHEIVQKCGGLPLAIVAIGGLLSTKPQTMFEWRKLCQNLRMELERNVHLTDLMKILSLSYDDLPHHLKSCMLYFGIYPEDYTINRKRLTRQWMAEGFVKNEEIRPLEEVAEEYLIELIQRSLVHVSKVGFDGKVKICQVHDVLREVIIRKMKDLCFCHLMHKVDEQVTVGVTRRFSIAAFSNSDLRNSGTRAIFIFDKVELPKEFMDGLSAKFKLLKVLDFENSLLNYVPDNLGNLFHLRYLNLSHTKVTVLPKSIGMLVNLETLDLRQTRVHELPKEINNLTKLRLLPAYYRKYEGNYSMLNFTDGVKMQKGIGGLISLQKLYFLEADRSGIDLIEELEKLTQLRKLGIKHVRQGHANALCAAIQAMKHLESLNIGAIAKDEILDLDLVSAPSHLRVLNLKCRLTKLPKWIPNLEYLVKLRLGLSKFEDDPLDSLMNLPSLLRLNLWDDAFYGEKLHFRKGGFHKLKELDLTRLNKLSSVSIDEKALPGLEHFRFNNNPQLKVLPRDLKNLEKLQFLGFADMPAENGDQSFMTMSCARFLLNSIYEISRFKFSWLQLT 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00235 925 Gene3D Ribonuclease Inhibitor 561 918 IPR032675 -
Trre6g00235 925 Gene3D - 426 517 IPR036388 -
Trre6g00235 925 SUPERFAMILY L domain-like 569 909 - -
Trre6g00235 925 Gene3D - 167 334 IPR027417 -
Trre6g00235 925 Pfam Rx N-terminal domain 5 93 IPR041118 -
Trre6g00235 925 Gene3D - 4 122 - -
Trre6g00235 925 PANTHER DISEASE RESISTANCE PROTEIN RP 36 854 IPR044974 GO:0006952
Trre6g00235 925 FunFam Probable disease resistance protein At1g61300 163 331 - -
Trre6g00235 925 CDD RX-CC_like 2 137 IPR038005 -
Trre6g00235 925 MobiDBLite consensus disorder prediction 140 159 - -
Trre6g00235 925 PRINTS Disease resistance protein signature 828 844 - -
Trre6g00235 925 PRINTS Disease resistance protein signature 199 214 - -
Trre6g00235 925 PRINTS Disease resistance protein signature 374 388 - -
Trre6g00235 925 PRINTS Disease resistance protein signature 279 293 - -
Trre6g00235 925 FunFam Probable disease resistance protein At1g63360 426 515 - -
Trre6g00235 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 440 IPR027417 -
Trre6g00235 925 Pfam NB-ARC domain 181 428 IPR002182 GO:0043531
Trre6g00235 925 Gene3D - 341 425 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00235 Trre-Chr6 1712169 1715468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00235 196 385 WRKY Transcription Factor Family AT5G45050 27.692 9.28e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00235 K13457 - vun:114181831 1199.11