Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00224 ATGGCAACAAAACTCAAACTCATAATTTCCATCCTTAGATTTCTTAGCTTCATGATCCTTTTAACAAAATCGATCGCACAATCTCCAAACTATGTAGGTGATGATTGTAAAAACTCAACAGAACAATCTCTTACATCTACATACAAATCAAACCTTAACAAAGTTCTCTCATTGCTTTCCTCTGATGCTATTGTAAGCAAAGGATATAATCACACAAACATAGGTGACAACACAGTTGATGGTGTCTATGGTCTCTATGATTGTAGGGGTGATGTTGTAGGTTCATTTTGTCAATTTTGTGTCTCTACCGCTGCCTCAGATATTCTTCAACGCTGTCCTAATAGAGCCTCAGCTACTATATGGTACAACTTTTGTATTCTCAGATATTCCAATCATAATTTCTCTGGAAAGCTAACAACAGATCCATCATGGAACAAATCTGGGTCAGAAAAGATCAATAATCCACAAGAACTTGAGAAAGCTGAGGATAATATGCAAAGTTTGATCAAAGAAGCTACTTTGGATACCAAAAAATTATTTGCAATGAGTGAGTTCAATTTGAGTAGCAATAAGAAAAGATATGGATTGGTGCAGTGTAGTAGGGACCTTAATGACAAGCAATGTAATCAATGTTTGGAGGCCATGTTGGACAAAGTTCCTAAATGCTGTGCTACAAAGATTAGTTGGCAAGTTCTTGCTCCAAGTTGTTTGATAAAATATGATAATGTTATGTTTTATCAACTTATTTCTCAAACATCAACTCCTTTGCCAGCCGGGCAAGGAGGTTCAAATAAATCAAATTATACCTTGATCATCACCATAGTCATTGTGTTGGTGGTGGCAGTTGCTCTCATGAGTTGTTGTATATACTTCATACGGAGGCGTAATCATTCAAATAGAGATGGACTACAATCAGAGACAATTCCTATCTCTCTTAATGATCGTAAAGAAAACGATTCATTAAATCCCGACCTCCCAATAATCCCTTTAACTTGGATTAGACAAAGTACTAATAACTTTTCTGAGTTAAGTAAACTAGGAGAAGGTGGATTTGGCCCTGTTTATAAGGGAAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGGCTATCTATAACATCTGGTCAAGGTTCACAAGAGTTCCAAAATGAAGTGATCTTTATAGCTAAATTGCAACATAGAAACCTTGTGAGACTTTTGGGTTGCTGCATTGAGGATAATGAAAAGTTGCTTGTATATGAATACATGCCAAACTCTAGCCTTGACTTTCATCTATTTGATGATGAAAAAAGAAAACTTCTAGATTGGAAGTTGAGATTGAACATTATTAATGGAATTGCTAAAGGACTATTGTACCTTCATGAAGACTCTAGACTTAGAGTAATCCATAGAGACTTAAAAGCTAGTAATGTTCTGCTAGATCAAGAGATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGGCATTTGAAAAAGACCAATGTCAAGAAAATACAAAAAGAGTTGTGGGCACATATGGATACATGTCTCCAGAGTATGCTATGGAGGGATTATATTCGGTGAAGTCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAGATAATTTGTGGAAAAAAAATTAGAAATTTCAATCTTGAAGAACACGGTCAAAGTCTTCTTGTATATAGTTGGAATCTTTGGTATGAAGGAAAAAGTTTGGAGCTTTTAGATCCAATATTGAAGAAGACATACATAGCAAATGAAGTTGTGAGGTGCATACACATTGGTTTGTTGTGTGTACAAGAAGATGCAATTGATAGACCAACCATGTCAAATGTTGTTGTCATGCTTGCAAGTGATACAATGGCACTTCCCAATCCTAATGATCCTGCATTTTCAGTTGGTAGAAAACTCAAGGAAGAAGAATCAACTTCAAAAGCTTCCAATGATCCTTCTGTTAATGAAGTTACAATATCAAATGTTTTCCCTAGGTAG 1977 0.3541 MATKLKLIISILRFLSFMILLTKSIAQSPNYVGDDCKNSTEQSLTSTYKSNLNKVLSLLSSDAIVSKGYNHTNIGDNTVDGVYGLYDCRGDVVGSFCQFCVSTAASDILQRCPNRASATIWYNFCILRYSNHNFSGKLTTDPSWNKSGSEKINNPQELEKAEDNMQSLIKEATLDTKKLFAMSEFNLSSNKKRYGLVQCSRDLNDKQCNQCLEAMLDKVPKCCATKISWQVLAPSCLIKYDNVMFYQLISQTSTPLPAGQGGSNKSNYTLIITIVIVLVVAVALMSCCIYFIRRRNHSNRDGLQSETIPISLNDRKENDSLNPDLPIIPLTWIRQSTNNFSELSKLGEGGFGPVYKGNLVDGTEVAIKRLSITSGQGSQEFQNEVIFIAKLQHRNLVRLLGCCIEDNEKLLVYEYMPNSSLDFHLFDDEKRKLLDWKLRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKDQCQENTKRVVGTYGYMSPEYAMEGLYSVKSDVFSFGVLLLEIICGKKIRNFNLEEHGQSLLVYSWNLWYEGKSLELLDPILKKTYIANEVVRCIHIGLLCVQEDAIDRPTMSNVVVMLASDTMALPNPNDPAFSVGRKLKEEESTSKASNDPSVNEVTISNVFPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00224 658 MobiDBLite consensus disorder prediction 641 658 - -
Trre6g00224 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 654 - -
Trre6g00224 658 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Trre6g00224 658 MobiDBLite consensus disorder prediction 630 658 - -
Trre6g00224 658 Pfam Domain of unknown function (DUF3403) 613 658 IPR021820 GO:0004674
Trre6g00224 658 CDD STKc_IRAK 346 611 - -
Trre6g00224 658 FunFam Liguleless narrow1 416 619 - -
Trre6g00224 658 SUPERFAMILY Protein kinase-like (PK-like) 323 626 IPR011009 -
Trre6g00224 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 415 - -
Trre6g00224 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Trre6g00224 658 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Trre6g00224 658 SMART serkin_6 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00224 658 Pfam Salt stress response/antifungal 162 242 IPR002902 -
Trre6g00224 658 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Trre6g00224 658 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Trre6g00224 658 ProSiteProfiles Protein kinase domain profile. 340 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00224 658 Gene3D - 30 134 IPR038408 -
Trre6g00224 658 Gene3D - 143 245 IPR038408 -
Trre6g00224 658 Pfam Protein tyrosine and serine/threonine kinase 344 608 IPR001245 GO:0004672|GO:0006468
Trre6g00224 658 Gene3D Phosphorylase Kinase; domain 1 306 415 - -
Trre6g00224 658 Coils Coil 158 178 - -
Trre6g00224 658 FunFam Cysteine-rich receptor-like protein kinase 28 32 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00224 Trre-Chr6 1654763 1662521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00224 1 658 Receptor kinase-like Gene Family AT4G05200 42.961 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00224 PK_Tyr_Ser-Thr 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00224 - - mtr:25490357 961.444