Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00201 ATGGCAGAAACTGCAGTATTGTTTGCCCTTGGGGAAGTGTTCCGATTCCTAAAAGATGAAACAAATCTGCTTAGTGGTGTACACAAAGATTTCTCAGACATCAAAGATGAACTAGAAAGCATTCAATTCTTCCTGAAAGATGCAGACAGAAGGGCAGCAGACGAAGCAGACACCAACAACGGAATAAGAACTTGGGTGAGACATATGACAGAAGTATCATTTCGCATTGAAGATGTCATTGATGAATATCTTCAGCTGATCCATAGGCCCAATCCTCCTGGATGCGGATCTTTAGTCCGCAAGATTCCAAGCCTAATAAAAACTTCAATTCCCCGTCATAAAATTGCATCAGAGATTCGGGACATTAAGTTGTCAATTCGAGGAATCAAGGAAAGAAGCGAGAGGTATAACTTTCAAATTTTACATGAACAAGGATCCTCAAGAAGCCGCAACAGCGGCACTGCAGAGACGGAAGATGGAAGATGGCGTGATCCTCGGATGTCTTCCCTTTTCATTGAAGAAACAGAAATCGTAGGATTGGAAGGCCCGAGAGAAGAATTATTAGGTTGGTTATTGGAGGGTGCAGCTGAGCGCACAGTGATTTCAGTGGTAGGAATGGGGGGACTAGGAAAAACCACTCTTGCCAAGCTAGTTTTTGACACCCAAAAGGTAACAGCACACTTTGATTGTCGGGCTTGCATCGCAGTTTCTCAATCATACACTGTGAGAGGGTTACTGAAAAAAATGATGGAGCAATTTTGTAAGGAAACCGAAGACCCTCTTCCAAAGATGTTGCACAAAATGGATGACCAATCATTGATCGTAGAGGTAAGGAGATACCTACAACATAAGAGGTATTTAATATTCTTTGATGATGTATGGCAAGAAGATTTTTCCGACCAGGTTGAATTTGTCTTGCCCAATGACAACAAAGGTAGTAGGATCATAATCACCACTAGAATGATGCATGTTGCAGATTTTTTCAAGAAATCCTTTCTAGTCCATGTTTACAACATGCAACTTTTGCCTCCAAATGAAGCATGGCAACTCTTCTGCAAGAAAGTATTTAGATCTGAACTTGGTGGGCACTGTCCCCCAGAACTTGAAGCAGTGTCAAAAGAAATTGTTCAAAAATTCAAGCAGCTGCCTCTGGCAATTGTAGCCATCGGTGGTCTACTTTCAACAAAATCTAAAACCATGTCTGAATGGCAAAAGGTCAGTCAAAATCTGAGTCTGGAGTTGGGACGAAATGCCCATTTAACTAGTCTAGCAAAGATTTTGTCACTTAGTTATGATAGCCTGCCTCACCACTTGAAACCATGCATTTTGTATTTTGGCTTATACCCAGAGGACTATGCTATTAATCAAGAGAGATTAACTCAACAATGGATAGCTGAAGGGTTTGTTAAATCGGATGAGAGGAGAACTCCAGAGAAAGTTGCAGAGGAGTACTTGTCTGAATTGATTCATAGAAGTTTGGTACAAGTCTCAAATGTTGACCCGGGAGGGAAAGTTGATACATGTCAAGTCCATGATTTATTGAGAGAAGTGATCATTAGAAAAATGAAGGATTTAAGTTTCTGCCATTGTGTGCATGAAGATGGAGAATCAATCGCAATTGGAAAAAGTAGACGCTTATCTATAACCACTACTCCCAACAATGTATTGAAAATCACTAACAGTTCACATTTTCGTGCTATTCATGTTTTTGAAAAAGGTGGATCATTGGAGCATTTCATGGGTAAACTGTATTCACGGTCTAGGATTTTGAAGGTACTTGACATTCAAGGTACATCAGTGAATCATATCCCAAAAAATTTGGGGAATCTTTTCTACTTGAGGTACTTAAACCTAAGTAATACAAAAGTACGGACTCTTCCTAAATCTGTTGGTGAACTGCAGAACTTAGAGACATTGGATTTAAGAGAAACACTTGTGCATGAGATACCATGTGAAATAAACAAGTTGACAAAGTTACGACATCTTCTTGCTTTTCAACGTAACTATGAAGAAAAATATTCTATTTTGGGCTTTACAAAAGGTGTGCTAATGGAAAAAGGTATTAAAAACTTGACTTCCCTACAAAATATTTTTCATGTGGAGGTAGATCACGGGGGAGTAGATCTTATTGAAGAGATGAAAATGTTAAGGCAGTTAAGAAAGTTAGGTTTAAGGCGTGTAAGAAGAGAATATGGGAATGCCTTAAGTGCTGCGATAATAGAGATGCAACACCTTGAATCACTTAATATCACTGCAATATTAGAGGATGAAATTATTGACTTGAACTTTCTGTCATCCCCACCCAAACTTCTGAAGCTTCATTTGAAAGCTAGACTAGAGAAGTTGCCTGATTGGATGCCAAAACTTGAGTGTCTTGTTAATATAAGGCTAGGTTTTTCTATGTTGAAAGATGATCCACTACAGTCGCTGAAAAACTTGCCAAATCTGCTGAGGCTCAGTTTGTGGAATAATGCCTATGACGGTGAAATTTTGCATTTTCACAATGGAGGGTTTAAAAAATTGAAACAACTGATTCTCAGTCACTTGAATAGAGTAAATTTTATCCTTATAGAGAATGGAGCTCTGCTCTCTCTTGAACATCTTAAAATGGAAAGGATCCCCCAACTGAAGGAGGTACCTTCTAGCATGAAACTCTTGGATAAACTCAAAGTCATTGACTTAGTTGATATGTCAAATGAACTTGTTAAGAGCATTGATCAAGACAATGGACACGACCACTGGATTATCAATCATATTCCTCTTGTATTAATCCGTCACTGGTTTGGCCCAAAATACTATGATTATGACAGTCGCACTATCAGCTCATCCTCCAAGGAGTAG 2841 0.3907 MAETAVLFALGEVFRFLKDETNLLSGVHKDFSDIKDELESIQFFLKDADRRAADEADTNNGIRTWVRHMTEVSFRIEDVIDEYLQLIHRPNPPGCGSLVRKIPSLIKTSIPRHKIASEIRDIKLSIRGIKERSERYNFQILHEQGSSRSRNSGTAETEDGRWRDPRMSSLFIEETEIVGLEGPREELLGWLLEGAAERTVISVVGMGGLGKTTLAKLVFDTQKVTAHFDCRACIAVSQSYTVRGLLKKMMEQFCKETEDPLPKMLHKMDDQSLIVEVRRYLQHKRYLIFFDDVWQEDFSDQVEFVLPNDNKGSRIIITTRMMHVADFFKKSFLVHVYNMQLLPPNEAWQLFCKKVFRSELGGHCPPELEAVSKEIVQKFKQLPLAIVAIGGLLSTKSKTMSEWQKVSQNLSLELGRNAHLTSLAKILSLSYDSLPHHLKPCILYFGLYPEDYAINQERLTQQWIAEGFVKSDERRTPEKVAEEYLSELIHRSLVQVSNVDPGGKVDTCQVHDLLREVIIRKMKDLSFCHCVHEDGESIAIGKSRRLSITTTPNNVLKITNSSHFRAIHVFEKGGSLEHFMGKLYSRSRILKVLDIQGTSVNHIPKNLGNLFYLRYLNLSNTKVRTLPKSVGELQNLETLDLRETLVHEIPCEINKLTKLRHLLAFQRNYEEKYSILGFTKGVLMEKGIKNLTSLQNIFHVEVDHGGVDLIEEMKMLRQLRKLGLRRVRREYGNALSAAIIEMQHLESLNITAILEDEIIDLNFLSSPPKLLKLHLKARLEKLPDWMPKLECLVNIRLGFSMLKDDPLQSLKNLPNLLRLSLWNNAYDGEILHFHNGGFKKLKQLILSHLNRVNFILIENGALLSLEHLKMERIPQLKEVPSSMKLLDKLKVIDLVDMSNELVKSIDQDNGHDHWIINHIPLVLIRHWFGPKYYDYDSRTISSSSKE 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00201 946 Gene3D Ribonuclease Inhibitor 556 912 IPR032675 -
Trre6g00201 946 FunFam Probable disease resistance protein At1g63360 431 520 - -
Trre6g00201 946 Gene3D - 165 333 IPR027417 -
Trre6g00201 946 PANTHER DISEASE RESISTANCE PROTEIN RP 33 865 IPR044974 GO:0006952
Trre6g00201 946 FunFam Probable disease resistance protein At1g61300 162 331 - -
Trre6g00201 946 CDD RX-CC_like 2 131 IPR038005 -
Trre6g00201 946 Gene3D - 431 522 IPR036388 -
Trre6g00201 946 Gene3D - 4 116 - -
Trre6g00201 946 SUPERFAMILY L domain-like 547 900 - -
Trre6g00201 946 PRINTS Disease resistance protein signature 200 215 - -
Trre6g00201 946 PRINTS Disease resistance protein signature 379 393 - -
Trre6g00201 946 PRINTS Disease resistance protein signature 631 647 - -
Trre6g00201 946 PRINTS Disease resistance protein signature 280 294 - -
Trre6g00201 946 Pfam NB-ARC domain 184 432 IPR002182 GO:0043531
Trre6g00201 946 Gene3D - 342 430 IPR042197 -
Trre6g00201 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 445 IPR027417 -
Trre6g00201 946 MobiDBLite consensus disorder prediction 141 161 - -
Trre6g00201 946 Pfam Rx N-terminal domain 5 90 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00201 Trre-Chr6 1468054 1470894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00201 200 398 WRKY Transcription Factor Family AT5G45050 27.941 3.20e-07 52.8