Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00191 ATGGGGTCTCAAGTTGTTGGCGATAACAATGAAAACCATTCGCAATTCCAGCCTCTGGTACGGCAAAACTCAATGTACAATCTTACCCTTGATGAAGTTCAGAGTCAATTAGGCGACTTGGGAAAACCACTAAGTAGTATGAACCTTGACGAGCTTCTGAAAAATGTATGGACTGTTGAGGCAAACCAATCTATTCGTATGGAAAATGAGAACGTAGCTCAAACCGAACAAGTTGTTTTCCAACGTCAGCCTAATCTATCGTTAAACAATGTATTAAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAGCAAAGCAAAGGTGAAAAGGAGATGAATTCTCAAGAGAGACAATGTACTTTGGGAGAGATGACTTTAGAGGATTTTTTGGTGGAAGCCGGCGTTGTTTCGGTTGCATCTTCTAATAGAAATAATACTAACGATCCTAAAGTTGGTGTTGTTGATTCAAATGTACCGTTACCGCAGTTTGCGCCGCATGGTCCATGGATACAATATGCACAGCCACATTTTCAGCATCCACAACAAAGTGTGATGGCGGCTTATATTCCGAGCCAAATGATAGCACAGCCAATGCACATGGCAGCCGGTGCTCCATTGGATGTTGTTCAATATGCAGATGGTCAGGTGGCGATGGCTGGGCCTATGATGGGAAACTTATCTGATGCAAAGAAATCTGCGAGAAAACGGGGACCAGAGGACATGGTAGAGAAAACTGTCGAGAAGAAGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCACGCTCAAGAGCAAGGAAACAGGCATACACAACTGAATTGGAGTTCAAAGTCTCGCGTCTGGAAGAGGAAAATGAAAAGCTGAGAAAGGAGAAGGAGCTTGTGAACATGTTAGCTAACGCTCCACCGCCCGAGCCTAAGTGTCAGCTTCGCCGCGTATCATCGGCTTCATTCTGA 960 0.4448 MGSQVVGDNNENHSQFQPLVRQNSMYNLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTVEANQSIRMENENVAQTEQVVFQRQPNLSLNNVLSKKTVDEVWRDIQQSKGEKEMNSQERQCTLGEMTLEDFLVEAGVVSVASSNRNNTNDPKVGVVDSNVPLPQFAPHGPWIQYAQPHFQHPQQSVMAAYIPSQMIAQPMHMAAGAPLDVVQYADGQVAMAGPMMGNLSDAKKSARKRGPEDMVEKTVEKKQKRMIKNRESAARSRARKQAYTTELEFKVSRLEEENEKLRKEKELVNMLANAPPPEPKCQLRRVSSASF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00191 319 Gene3D - 247 301 - -
Trre6g00191 319 SMART brlzneu 245 302 IPR004827 GO:0003700|GO:0006355
Trre6g00191 319 Pfam bZIP transcription factor 249 294 IPR004827 GO:0003700|GO:0006355
Trre6g00191 319 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 247 299 - -
Trre6g00191 319 Coils Coil 272 302 - -
Trre6g00191 319 MobiDBLite consensus disorder prediction 297 319 - -
Trre6g00191 319 CDD bZIP_plant_BZIP46 249 295 - -
Trre6g00191 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 292 IPR004827 GO:0003700|GO:0006355
Trre6g00191 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Trre6g00191 319 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 317 IPR043452 GO:0003700|GO:0045893
Trre6g00191 319 SUPERFAMILY Leucine zipper domain 249 296 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00191 Trre-Chr6 1408798 1410610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00191 17 319 bZIP Transcription Factor Family AT3G56850 51.792 9.66e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre6g00191 bZIP_1 7.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00191 K14432 - gmx:100784924 427.172