Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00128 ATGGCAACTAAGTTAACCCTTCTCTTCCTTTTCTCAACTCTCCTCACAATTGTAACTTCAACACCAGCAAGTTTCATCAAATCCTCATGTAGCACAACATCATACCCAGCACTTTGTGTTGAATCACTCTCTAGCTATGCATCAACAATCCAACAAGATCCTCACCAATTAGTCCAAACAGCTTTATCACTTAGTCTCAACAAAACTCAATCCACAAAAACCTTTGTTGTAAAATGTAAAAGTTTTAAGAATCTTAAACCAAGAGAATATGCTGCTCTTCATGATTGTGTTGAAGAAATTACTGATAGTGTCGATAGGCTTAGCCGTTCATTAAAAGAGCTTAAACTTTGCAAGATTAGTGGTCAAGATTTCAATTGGCATATAAGCAATGTTCAGACATGGTTACTAGTAATGCTCTTTCACTTATCAATCAATATGCTACTAATCACTAAGCTTCATTTTACACGAGACAACCACCTATGTGACCTTCATGAAGAGAAAATAAGTTACAGTGCCTCTCTACCGTTGTTGCTGCACCTCCACCATCTCCAATCATCTTCTCCGCCGAGACCTTCGCGGAAAAACTCATAG 591 0.3807 MATKLTLLFLFSTLLTIVTSTPASFIKSSCSTTSYPALCVESLSSYASTIQQDPHQLVQTALSLSLNKTQSTKTFVVKCKSFKNLKPREYAALHDCVEEITDSVDRLSRSLKELKLCKISGQDFNWHISNVQTWLLVMLFHLSINMLLITKLHFTRDNHLCDLHEEKISYSASLPLLLHLHHLQSSSPPRPSRKNS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00128 196 Pfam Plant invertase/pectin methylesterase inhibitor 24 135 IPR006501 GO:0004857
Trre6g00128 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 139 IPR035513 -
Trre6g00128 196 CDD PMEI-like_3 28 135 - -
Trre6g00128 196 SMART PMEI_2 21 178 IPR006501 GO:0004857
Trre6g00128 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 141 IPR035513 -
Trre6g00128 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 135 - -
Trre6g00128 196 NCBIfam pectinesterase inhibitor domain 6 135 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00128 Trre-Chr6 841919 843647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00128 18 135 Carbohydrate Esterase AT5G53370 28.814 1.88e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00128 - - lja:Lj0g3v0070759.1 200.675