Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00117 ATGGAACTGAAAGGGAATCATACTCTCCTTGGTGAAACTGCAACCTTAACAAGGACAAGATCAAGGCTTGGCGCAGGCACGCCTTCGAGTCTGTCATGCTCTCCTACAGCCACTTCAACTTTTCTGCACGGTCCGTCGTTGACAATTCCAAGAAAGAAGATAGGAATTCTCGATGATGTTCGTTCTAACGGTTGGCTTGATGCAATGAGATCATCTTCTCCTACTCGCAAGAAAATATCTATGGATGTTGGTCATAGTGTTGCGACTTCTGAAGCTGATGCTGCTTATTTAACCTGGCTGTTAGAGTTCCCATCGGCACTTTCATCCTTTGAGCAAATTACTAACTGTGCAAAAGGAAAGAAAATAGCATTGTTTCTGGATTATGACGGGACTCTTTCGCCGATTGTTGACAATCCTGACCGTGCTTTCATGTCCGACAACATGCGTGCTGCTGTTAAAAATGTGGCCGAATATTTTCCGACCGCAATAATTAGTGGAAGAAGTCGTGAAAAGGTACATGAATTTGTCGGAATAACGGATCTCTATTATGCTGGTAGTCATGGAATGGACATAATTGGTCCTCTTAGACAATCTGTATCTGATAAGAAGGGCAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCTATGATTGACGAGGTACGTAGGTTGTTCATTGAGTGTACAAAAGACATCAAAGGAGCAAAAGTTGAGAACAATAAGTTTTGTGTCTCTGTACATTATCGTAACGTAGACGAGGAGAATTGGGATATGGTGGCACAACGCGTTTATGATATTATGAAAGACTATCCAAATTTGCGATTAACTCACGGTCGGAAGGTTTTAGAGGTCCGACCGGTGATTGACTGGGACAAGGGAAAAGCTGTTACATTTTTGCTCGAGTCACTTGGACTTAACGATGACGACGATGTGCTAGCTATATATATCGGTGACGATCGGACAGATGAAGACGCATTTAAGGCTTTGAGCGAGGTTAATAAAGGTTTTGGAATCTTAGTGTCTTCGGCTCCTAAAGAAAGCAGCGCAGTTTACTCTCTTTCTGATCCTTCAGAGGTGATGGAATTTCTCAAGTCACTTGTGGTATGGAAATCAAGCTCTATAGTATAA 1134 0.4233 MELKGNHTLLGETATLTRTRSRLGAGTPSSLSCSPTATSTFLHGPSLTIPRKKIGILDDVRSNGWLDAMRSSSPTRKKISMDVGHSVATSEADAAYLTWLLEFPSALSSFEQITNCAKGKKIALFLDYDGTLSPIVDNPDRAFMSDNMRAAVKNVAEYFPTAIISGRSREKVHEFVGITDLYYAGSHGMDIIGPLRQSVSDKKGKEVNLFQPAAEFLPMIDEVRRLFIECTKDIKGAKVENNKFCVSVHYRNVDEENWDMVAQRVYDIMKDYPNLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNDDDDVLAIYIGDDRTDEDAFKALSEVNKGFGILVSSAPKESSAVYSLSDPSEVMEFLKSLVVWKSSSIV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00117 377 FunFam Trehalose 6-phosphate phosphatase 219 377 - -
Trre6g00117 377 MobiDBLite consensus disorder prediction 1 31 - -
Trre6g00117 377 CDD HAD_TPP 123 363 - -
Trre6g00117 377 NCBIfam trehalose-phosphatase 119 369 IPR003337 GO:0003824|GO:0005992
Trre6g00117 377 Gene3D - 122 214 IPR023214 -
Trre6g00117 377 Gene3D - 215 376 IPR023214 -
Trre6g00117 377 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Trre6g00117 377 NCBIfam HAD-IIB family hydrolase 124 331 IPR006379 -
Trre6g00117 377 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 41 375 IPR044651 GO:0004805|GO:0005992
Trre6g00117 377 MobiDBLite consensus disorder prediction 10 31 - -
Trre6g00117 377 SUPERFAMILY HAD-like 123 370 IPR036412 -
Trre6g00117 377 Pfam Trehalose-phosphatase 125 358 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00117 Trre-Chr6 791058 793721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00117 120 375 Trehalose Biosynthesis Gene Families AT1G23870 27.636 6.34e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00117 K01087 - gmx:100819495 552.747