Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00077 ATGGCCAACAATTTTCCTAAGAAATTGTTTGTTATTATTCTCAATCTACTATTCTTCTTCTTCTCTCAATTATCCACTGCAATTGATACAATCACCCAATATCAATCTCTAATTGATGATGGTCACACTTTGGTTTCTAATGATGGAACTTTTGAGTTAGGCTTCTTTAGACCAGGCAGTTCCACAAATCGATATGTTGGAATATGGTACAAAAACATCCCAAATAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAACACAACAATTCAAACTCAACCATGTTGGTTATAAGCAAAGAGGGAAACCTTGTACTACTTACCAACAACAATCAAACTCTTGTTTGGTCAACAAACATCACAACACAATCATTGTCTAATAATACAAGTTCTCATGTAGCTCAACTATTAGACAATGGAAACTTTGTACTCAAAGACAACAACAATAGTGATCCACAAAGTAATAATAATTTCTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTATTGCCAGAAATGAAACTCGGATGGGACCTAAAAACCGGTCTCAATCGTCAATTAACTTCTTGGAAAAATTGGGATGATCCGTCTTCGGGAGATTTGACTTGGGGTATTGTTCTTAGTAGTAATCCAGAAATTGTAATGAAAAAAGGGTCAACTGAAATTCATAGAAGTGGCCCTTGGAATGGAGTTGGATTTAGTGGAGCACCTGTGGAGGTTATTACTTCAACTGTTGTAGTTACAAAATCTATAAACAATTCTGATGAAGTTTATTACACATATAGTCTTGTAAACACGAGTGTGGTTTCAATAACTTATTTGAATCAAACAGTTGATCTTCGTCGACGAATTGCATGGAGTCAAGAGGAGAATACTTGGAAGGTTTATGAGTCCGTTCCAACAGATTATTGTGATGAATATAATCATTGTGGTCCATATGGAAATTGCGTCCATAACGAATCTTTAAGTACATGTCTATGTTTATATGGATTTGAGCCTAAATCGTCGCAAAATTGGAACACATTTAATTCGACACAAGGATGTGTGCGCAAAGGTGAAGATACTTGTGGGGTGAATGATAGTTTTCAAAGATTTTATGGATTGAAATTGCCCGAAACAAAACATACTTGGGTTGATGCTAATATGACACTAGATGATTGTAAGAATAAATGCTTGGCAGATTGTTCTTGCACGGCTTATTCAAACTTGGATGTGGGTGGAGATGGTAGTGGTTGTTGTATTTGGTTTGGTGATCTTATTGATTTAAAACAAATCTCATCATTTCAACAATATCTATATATTCGAACGGACGATTCTACCGTTGATTCAGGTGGACATAACAAAAAGAAGACTTTGACAATTGCAATTACTATTCCATTGGTCATTGTTTTTCTACTCATGATCATAGTCTTCTACATTTACAAAAAAAGAAAGCAAAGAGTGGACATCACTTTAGCTGAAGATGAAGATGAAGACCAACAAGATTTTGACCTTCCTTTCTTTAGTTTTTCCACATTGATTAGTGCCACAAATGACTTCTCAAACTATAACAAACTTGGAGAAGGTGGGTTTGGACCAGTATATAAGGGTACACTAACTACAGATGGGCAAGAGATTGCCATCAAAAGGCTTTCAGGAAGTTCAAGACAAGGATCAAAAGAATTTAAAAATGAAGTTATATTATGTGCAAAACTTCAACACCGAAATCTAGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAAGAGAGAATGCTTGTCTACGAATATATGCCTAACAAAAGCTTAGATTCATTTCTTTTTGATCCGGCCCAAAAGAAACTTCTAGATTGGAGCACGCGCTTCAACATCATATGTGGAGTTGCTCATTTTGGTTTGGCAAAAATTTGTGGAGATGATCAAGTTGAAGGAAAAACAAAAAGAGTAGTTGGAACACATGGTTATATGGCTCCAGAATATGCCATTGACGGTCTATTCTCTACAAAATCTGATGTATTTAGCTTTGGCATATTATTATTAGAGATTGTGAGTGGAAAGAAAAATAAAGGACTTACATATTCAAGCAACAATAATCTTGTTAGGCATGCTTGGAGTTTGTGGAAAGAAGGGGATTCAAAAGAACTTATTGATGTATCTTTTGGGGACTCGTATATTCTATCCGAAGCTTTACGATGCATACAAGTTGGTCTTTTATGTTTACAACGCCATCCTGATGATAGACCAAATATGACATATGTGCTTGCGATGTTGACCAATGATACTATTTTAGCTCAACCGAATGAACCCGGTTTCATAATAAAAAGGATCTCAACTGATGAAGAATCTACAACAAAGTCTTCTATCTCAATTAATGATGTCACTATTACATTATTAGATGTTAGATGA 2391 0.3526 MANNFPKKLFVIILNLLFFFFSQLSTAIDTITQYQSLIDDGHTLVSNDGTFELGFFRPGSSTNRYVGIWYKNIPNRRIVWVANRDNPIKHNNSNSTMLVISKEGNLVLLTNNNQTLVWSTNITTQSLSNNTSSHVAQLLDNGNFVLKDNNNSDPQSNNNFLWQGFDFPCDTLLPEMKLGWDLKTGLNRQLTSWKNWDDPSSGDLTWGIVLSSNPEIVMKKGSTEIHRSGPWNGVGFSGAPVEVITSTVVVTKSINNSDEVYYTYSLVNTSVVSITYLNQTVDLRRRIAWSQEENTWKVYESVPTDYCDEYNHCGPYGNCVHNESLSTCLCLYGFEPKSSQNWNTFNSTQGCVRKGEDTCGVNDSFQRFYGLKLPETKHTWVDANMTLDDCKNKCLADCSCTAYSNLDVGGDGSGCCIWFGDLIDLKQISSFQQYLYIRTDDSTVDSGGHNKKKTLTIAITIPLVIVFLLMIIVFYIYKKRKQRVDITLAEDEDEDQQDFDLPFFSFSTLISATNDFSNYNKLGEGGFGPVYKGTLTTDGQEIAIKRLSGSSRQGSKEFKNEVILCAKLQHRNLVKVLGCCIQGEERMLVYEYMPNKSLDSFLFDPAQKKLLDWSTRFNIICGVAHFGLAKICGDDQVEGKTKRVVGTHGYMAPEYAIDGLFSTKSDVFSFGILLLEIVSGKKNKGLTYSSNNNLVRHAWSLWKEGDSKELIDVSFGDSYILSEALRCIQVGLLCLQRHPDDRPNMTYVLAMLTNDTILAQPNEPGFIIKRISTDEESTTKSSISINDVTITLLDVR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00077 796 ProSiteProfiles Protein kinase domain profile. 516 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00077 796 PIRSF SRK 2 625 IPR024171 GO:0004674
Trre6g00077 796 PIRSF SRK 623 796 IPR024171 GO:0004674
Trre6g00077 796 CDD PAN_AP_plant 358 439 - -
Trre6g00077 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 165 - -
Trre6g00077 796 SUPERFAMILY Protein kinase-like (PK-like) 498 770 IPR011009 -
Trre6g00077 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 199 IPR036426 -
Trre6g00077 796 Pfam S-locus glycoprotein domain 227 338 IPR000858 GO:0048544
Trre6g00077 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 481 592 - -
Trre6g00077 796 CDD B_lectin 40 168 IPR001480 -
Trre6g00077 796 ProSiteProfiles Bulb-type lectin domain profile. 29 159 IPR001480 -
Trre6g00077 796 Pfam D-mannose binding lectin 78 194 IPR001480 -
Trre6g00077 796 Gene3D Transferase(Phosphotransferase) domain 1 621 763 - -
Trre6g00077 796 Gene3D - 22 164 IPR036426 -
Trre6g00077 796 Pfam Domain of unknown function (DUF3403) 753 796 IPR021820 GO:0004674
Trre6g00077 796 SMART blect_4 35 168 IPR001480 -
Trre6g00077 796 Gene3D Phosphorylase Kinase; domain 1 478 592 - -
Trre6g00077 796 ProSiteProfiles PAN/Apple domain profile. 359 441 IPR003609 -
Trre6g00077 796 Pfam PAN-like domain 359 425 IPR003609 -
Trre6g00077 796 Pfam Protein tyrosine and serine/threonine kinase 519 617 IPR001245 GO:0004672|GO:0006468
Trre6g00077 796 Pfam Protein tyrosine and serine/threonine kinase 619 696 IPR001245 GO:0004672|GO:0006468
Trre6g00077 796 ProSiteProfiles EGF-like domain profile. 303 340 IPR000742 -
Trre6g00077 796 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 742 - -
Trre6g00077 796 SMART ntp_6 360 439 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00077 Trre-Chr6 542364 545869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00077 479 791 Receptor kinase-like Gene Family AT4G11530 45.810 2.83e-93 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g00077 PK_Tyr_Ser-Thr 7.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00077 - - tpra:123915417 1264.98