Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00053 ATGGAATCTCGATTGGTTGATGGAAGTGACCGGACAGAAGTTTCTGCGGATGCTGGTTTCGTGGAACCAAATGATGGGTGTAGATTGCAAGAGAATTATTCTGGGAGAGAATTGGGTAGCTCTCATCATGACCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGCATCTGAAGATGCTGCTAAGATATTTTATGACGAATACGCTCGACATGTTGGATTTGTCATGCGTGTGATGTCCTGTCGACGGTCAGAAAGAGATGGTAGGATTCTTGCTCGCAGGCTTGGGTGTAATAAGGAAGGTCATTGTGTCAGCTTACCAGGAAAGCTTGGGCCAGTTCGGAAATCAAGGGCCAGCTCAAGGGAAGGTTGTAAGGCGATGATTCATATCAAGTATGATAAATCTGGAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCACTAGTAGTCTCTCCTCGTGAAGCACGGCAAACAGTGGATGAGAAGGATAAGAAAATTCAGGACCTAACAGCAGAACTTCGGATTAAGAAACGGTTGTGTGTAACTTATCAAGAACAGTTAACTTCTTTTATGAAAATTGTGGAAGAGCACAGTGACAAGCTGTCTGCAAGAATTCATCACATACTTGATAATCTTAAAGAATATGAATCCATAGAAGAGCTTTTGCACCAAACGTAG 690 0.4188 MESRLVDGSDRTEVSADAGFVEPNDGCRLQENYSGRELGSSHHDHAIQEPYEGMEFASEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSLPGKLGPVRKSRASSREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTVDEKDKKIQDLTAELRIKKRLCVTYQEQLTSFMKIVEEHSDKLSARIHHILDNLKEYESIEELLHQT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00053 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 221 - -
Trre6g00053 229 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
Trre6g00053 229 Coils Coil 163 183 - -
Trre6g00053 229 Coils Coil 219 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00053 Trre-Chr6 382537 383789 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre6g00053 FAR1 2.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00053 - - gmx:100787741 375.17