Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00010 ATGAGAAATTATTCTCAGGAACACGCATCATTACCCCCTAAGATCAGTAAATATGAAATAAATGAATCATGTTTAGAAGGATTAATGTCAGAATTAGGCAAAGAGTGCGGACTAAGGCGACATCATCGAACATATTCGGATAGCATGCTATCTGAGCAACAGCAGCAGCAGCAGCAGGAAGTACCTTATTGGTTGAAAGATCTGCTTGATGATGATGATAATGATAATGATGAGCCTGAAGAATCAGAAGAGAAGCTGAAGCCTAGTACTAATGTATGCAGCAGCAGCAGCAACAACAGCAGGACTCATAGAAGATCATCAAGTGACTCCTTAGCATACTTACATAATAAAACAATTCTTCAATATTCTCCAGAAAGGAAGGAACAAAATACTATGTATATTGTAGCTGCAGACCAACAACCCTCCTTTCTGCACCAAAATCATCCTAGAACTGATCATTCAAAACACGGAAAAAGGCATTCAGCTCAACAATACCGGGCAAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTATCCAAGCTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTCATATTAGGTATGGAGAATAGGGCCCTCAAACAACGGTTGGACAGTTTATCCCAGGAGCACTTCGTCAAATGTTTGGAGCAGGAAGTGCTTGAGAGAGAAATCACAAGACTTAGAAATCTGTATCAACAACAACAACACAAACAGCAGCAGCAGCAACAACAGCAAAAGCATCATGGTAGGAATCGATCTAAACAACGTCAAGATCTTGATTCATCAATTGCCAAACTTTCTTTGAAGAATAAGGGAACCGAATCATCGCAGAAAGCCAGATAG 879 0.3982 MRNYSQEHASLPPKISKYEINESCLEGLMSELGKECGLRRHHRTYSDSMLSEQQQQQQQEVPYWLKDLLDDDDNDNDEPEESEEKLKPSTNVCSSSSNNSRTHRRSSSDSLAYLHNKTILQYSPERKEQNTMYIVAADQQPSFLHQNHPRTDHSKHGKRHSAQQYRARKVQYIGELERSIQALQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFVKCLEQEVLEREITRLRNLYQQQQHKQQQQQQQQKHHGRNRSKQRQDLDSSIAKLSLKNKGTESSQKAR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00010 292 Coils Coil 229 256 - -
Trre6g00010 292 Gene3D - 146 224 - -
Trre6g00010 292 SUPERFAMILY Leucine zipper domain 158 209 IPR046347 GO:0003700|GO:0006355
Trre6g00010 292 MobiDBLite consensus disorder prediction 272 292 - -
Trre6g00010 292 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 3 146 IPR044797 -
Trre6g00010 292 MobiDBLite consensus disorder prediction 243 292 - -
Trre6g00010 292 MobiDBLite consensus disorder prediction 88 109 - -
Trre6g00010 292 MobiDBLite consensus disorder prediction 145 164 - -
Trre6g00010 292 MobiDBLite consensus disorder prediction 243 258 - -
Trre6g00010 292 MobiDBLite consensus disorder prediction 68 109 - -
Trre6g00010 292 SMART brlzneu 152 210 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00010 Trre-Chr6 73650 75511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00010 157 225 bZIP Transcription Factor Family AT2G42380 52.174 1.17e-15 73.6