Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00009 ATGGAAATTTCAAATAGTTCACCAAACATGAGAAATTATTCTCAGGAACACGCATCATTACCCCCTAAGATCAGTAAATATGAAATAAATGAATCATGTTTAGAAGGATTAATGTCAGAATTAGGCAAAGAGTGCGGACTAAGGCGACATCATCGAACATATTCGGATAGCATGCTATCTGAGCAACAGCAGCAGCAGCAGCAGGAAGTACCTTATTGGTTGAAAGATCTGCTTGATGATGATGATAATGATAATGATGAGCCTGAAGAATCAGAAGAGAAGCTGAAGCCTAGTACTAATGTATGCAGCAGCAGCAGCAACAACAGCAGGACTCATAGAAGATCATCAAGTGACTCCTTAGCATACTTACATAATAAAACAATTCTTCAATATTCTCCAGAAAGGAAGGAACAAAATACTATGTATATTGTAGCTGCAGACCAACAACCCTCCTTTCTGCACCAAAATCATCCTAGAACTGATCATTCAAAACACGGAAAAAGGCATTCAGCTCAACAATACCGGGCAAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTATCCAAGCTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTCATATTAGGTATGGAGAATAGGGCCCTCAAACAACGGTTGGACAGTTTATCCCAGGAGCACTTCGTCAAATGTTTGGAGCAGGAAGTGCTTGAGAGAGAAATCACAAGACTTAGAAATCTGTATCAACAACAACAACACAAACAGCAGCAGCAGCAACAACAGCAAAAGCATCATGGTAGGAATCGATCTAAACAACGTCAAGATCTTGATTCATCAATTGCCAAACTTTCTTTGAAGAATAAGGGAACCGAATCATCGCAGAAAGCCAGATAG 906 0.3951 MEISNSSPNMRNYSQEHASLPPKISKYEINESCLEGLMSELGKECGLRRHHRTYSDSMLSEQQQQQQQEVPYWLKDLLDDDDNDNDEPEESEEKLKPSTNVCSSSSNNSRTHRRSSSDSLAYLHNKTILQYSPERKEQNTMYIVAADQQPSFLHQNHPRTDHSKHGKRHSAQQYRARKVQYIGELERSIQALQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFVKCLEQEVLEREITRLRNLYQQQQHKQQQQQQQQKHHGRNRSKQRQDLDSSIAKLSLKNKGTESSQKAR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00009 301 MobiDBLite consensus disorder prediction 97 118 - -
Trre6g00009 301 MobiDBLite consensus disorder prediction 154 173 - -
Trre6g00009 301 MobiDBLite consensus disorder prediction 252 267 - -
Trre6g00009 301 MobiDBLite consensus disorder prediction 77 118 - -
Trre6g00009 301 Coils Coil 238 265 - -
Trre6g00009 301 CDD bZIP_plant_RF2 167 210 IPR044759 GO:0003700|GO:0006355
Trre6g00009 301 MobiDBLite consensus disorder prediction 1 19 - -
Trre6g00009 301 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 11 155 IPR044797 -
Trre6g00009 301 MobiDBLite consensus disorder prediction 1 24 - -
Trre6g00009 301 SMART brlzneu 161 219 IPR004827 GO:0003700|GO:0006355
Trre6g00009 301 SUPERFAMILY Leucine zipper domain 167 218 IPR046347 GO:0003700|GO:0006355
Trre6g00009 301 MobiDBLite consensus disorder prediction 281 301 - -
Trre6g00009 301 MobiDBLite consensus disorder prediction 252 301 - -
Trre6g00009 301 Gene3D - 155 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00009 Trre-Chr6 73623 75511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00009 166 234 bZIP Transcription Factor Family AT2G42380 52.174 1.12e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00009 - - tpra:123914043 466.848