Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05979 ATGAGTGGCGGAGGTGAAGGAGAAGAAGAGACAACACTTGAGTTCACTCCCACCTGGGTTGTCGCTGCCGTTTGTACTGTCATCGTCGCCATTTCCCTTGCTGCCGAGCGTTTGCTTCACTATGGCGGAAAGTTTCTCAAACGCAAGGATCAAAAGCCACTTTACGAAGCTCTCCAAAAGATCAAAGAAGAGTTGATGCTTCTGGGTTTTATTTCTCTGCTTCTCACTGTTTCCCAAAATGGACTTACCAAAATATGCGTTCACGAAAGTGTTATGCGCCACATGCTTCCCTGTACTTCCCAGGATAAGGAGGAGAAGGAACATTCTGCTTTCTCTTTTCCAGCCAGAATTGCAAGGCGTCTCCTAGCAGAAGCAGCAGCAGCAGCAACAGCAGCAGCAGAACACAAAACCTCTTACTGCGCTCGCAAGAACAAGGTTCCTTTATTATCTCTCGAAGCTTTGCATCACCTCCACATCTTCATTTTTGTCCTCGCTGTCGTCCACGTCACTTTTTCAGTTCTCACCGTTGTTTTTGGAGGCGCAAGAATACGTCAGTGGAAGAAATGGGAAGATTCTATTGCAAAGGAGAACTATGATACTACCAAACTTCTCAAACCAAAGTTGACTCAAGTTCAACAACATGAATTTATCAAGGGTCGTTTTTCCGGTCTCGGCAAAGACTCTGCTTTAGTCGGTTGGTTGCAATCCTTTTTCAAGCAATTCTATGGTTCTGTTACAAAATCAGATTATGTCACTTTAAGACTTGGTTTCATTATGACCCACTGCAAGTCAAACCCAAAGTTTAATTTTCACAAATACATGATTCGTGCCCTTGAAGATGATTTCCGGCAAGTTGTTGGCATAAGTTGGTATCTTTGGCTCTTTGTGGTCATCTTCTTATTGTTAAATATCAATGGTTGGCATACTTATTTCTGGATTGCTTTCGTTCCTTTCATTCTTTTACTCTCTGTGGGAACAAAGCTGGAGCATGTAATAACCCAATTAGCTCATGAAGTTGCTGAAAAGCACGCAGCCATAGAAGGTGACTTGGTTGTACAACCTTCAGATGGTCACTTCTGGTTTCATAGGCCCCACATTGTTCTCTTCTTGATTCACTTTATCCTTTTCCAAAATGCTTTTGAGATAGCATTTTTTTTCTGGATATGGGTTACATACGGATTTGACTCTTGTATAATGGGACAAGTTCGTTACATTGTTCCAAGGCTCGTTATTGGGGTATTTATTCAGTTACTGTGCAGCTACAGCACCCTGCCACTCTATGCACTTGTTACACAGATGGGAACTCACTTTAAGAGGGCAATATTTAATGATCATGTGCAAGTGGGCCTTGTTGGTTGGGCAGAAAAGGTAAAAAAGAAGAAAGCGCTAAAAGCTGATGGCCACACTAGCCAAGGAAGTTCTCATGATCATGAGGATTCTAGTAAAGGAGTTCAGCTTGGGTCAGTTTTCCAGAAGAGGACATCAGCGCCCGAAGAGATTACTTCTGTAACCAAAGCTGATTCTAGTACAGGAATTCAGCTTGGGTCAGTTTTCCAGAAGAGGACATCAGCGCCCGAAGACATTACTTCTGTCACCAAAGCTGAGGGGTCCAACTGA 1617 0.431 MSGGGEGEEETTLEFTPTWVVAAVCTVIVAISLAAERLLHYGGKFLKRKDQKPLYEALQKIKEELMLLGFISLLLTVSQNGLTKICVHESVMRHMLPCTSQDKEEKEHSAFSFPARIARRLLAEAAAAATAAAEHKTSYCARKNKVPLLSLEALHHLHIFIFVLAVVHVTFSVLTVVFGGARIRQWKKWEDSIAKENYDTTKLLKPKLTQVQQHEFIKGRFSGLGKDSALVGWLQSFFKQFYGSVTKSDYVTLRLGFIMTHCKSNPKFNFHKYMIRALEDDFRQVVGISWYLWLFVVIFLLLNINGWHTYFWIAFVPFILLLSVGTKLEHVITQLAHEVAEKHAAIEGDLVVQPSDGHFWFHRPHIVLFLIHFILFQNAFEIAFFFWIWVTYGFDSCIMGQVRYIVPRLVIGVFIQLLCSYSTLPLYALVTQMGTHFKRAIFNDHVQVGLVGWAEKVKKKKALKADGHTSQGSSHDHEDSSKGVQLGSVFQKRTSAPEEITSVTKADSSTGIQLGSVFQKRTSAPEDITSVTKAEGSN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05979 538 PANTHER MLO-LIKE PROTEIN 1 9 505 IPR004326 GO:0006952|GO:0016020
Trre5g05979 538 Pfam Mlo family 11 479 IPR004326 GO:0006952|GO:0016020
Trre5g05979 538 MobiDBLite consensus disorder prediction 465 482 - -
Trre5g05979 538 MobiDBLite consensus disorder prediction 514 538 - -
Trre5g05979 538 MobiDBLite consensus disorder prediction 465 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05979 Trre-Chr5 59079262 59083640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05979 5 474 MLO family AT4G02600 72.521 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05979 K08472 - gmx:100785800 789.26