Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05754 ATGAAGCTCAACTTAGCTTCTGTTGTAGCTTTGCTTCTATGTGTTGTTATTTCTCTGTTCCACATTGCTTCAGCTGAAGATCCATATAAATTCTTCAACTGGAATGTTACTTATGGAGACATTTACCCACTTGGTGTTCGCCAAAGGGGTATATTGATCAATGGGCAATTCCCTGGTCCAGACATTCACTCTGTTACAAATGACAACCTCATTATCAATGTCTTCAACAGTTTGGATGAACCCTTTCTTATCTCCTGGAATGGGATCCAGCAGAGAAGGAACTCGTTTGAAGATGGTGTATTTGGAACAACATGCCCCATTCCACCAGGGAAGAACTTCACATACATACTTCAAGTAAAAGATCAAATTGGAAGTTTTTACTATTTTCCATCTCTAGCATTTCATAAAGCAGCTGGTGGTTTTGGAGGCATTAGGATACTCAGTAGGCCCAGAATTCCAGTACCTTTCCCTGATCCAGCTGGTGATTACACTGTCCTTATTGGTGATTGGTACAAGTCTAACCATACGACTCTGAAAGCCCATCTTGATAGAGGAAAGAAGCTGCCTATACCTGATGGAGTCCTCATCAATGGTCGTGGACCTAATGGACTAACTTTCAATGTAGAACAAGGAAAGACATACAGGCTTAGGATATCAAATGTAGGATTGCAACATTCCCTAAACTTTCGAATTCAGAACCACAAATTGAAGCTTGTAGAAGTGGAAGGAACTCACACTCTTCAAACTACATACTCTTCACTTGATGTTCATGTAGGACAATCTTATTCAGTACTAGTAACTGCAGATCAACCTGCTCAGGACTACTACATTGTCGCTTCAACTCGATTCTCATCTAAGATCCTCACAACCACTGCTGTGCTTCGCTATAGCAACTCTGCAGGCGCAGTTTCAGGCCCACCACCTGGTGGTCCTACAATCCAAGTCGATTGGTCTTTGAACCAGGCCCGCTCAATCAGGACTAACCTTACAGCAAGTGGACCAAGGCCGAACCCACAAGGGTCCTACCATTACGGTCTCATACCAACAGCAAAGACAATCATTCTGGCTAGTTCTTCTGGTCAAGTTAATGGCAAACAAAGATACGCAATTAACAGTGTATCTTATGTTGCCCCAGACACACCTCTTAAGCTCGCCGACTACTTCAAAATCTCCGGTGTTTTCCGCGTTGGAAGCATATCCGACAGACCTACCGGTGGTGGCATTTACCTTGACACATCTGTGTTGCAAGCTGATTACAGAACTTTCGTTGAAATTGTCTTCCAAAACAACGAGAACATCGTTCAGAGCTATCATCTTGATGGCTACCAATTTTGGGTGGTTGGTATGGATGGAGGACAATGGACAAGTTCCAGCAGAAACAACTACAATCTCCGAGATGCAGTAGCGCGTTCCACCACTCAGGTATATCCGTATTCGTGGACTGCTATTTATATTGCCTTGGACAACGTTGGCATGTGGAACTTGAGGACTGAGTTTTGGGCACGACAGTATCTCGGCCAACAGTTTTATTTGCGTGTTTACACAGCATCAACCTCAATCAGAGATGAGTTTCCAATTCCAAAGAATGCTCGTCTCTGTGGTAGGGCTAGTGGAAGACACACCCGACCCCTTTGA 1635 0.4379 MKLNLASVVALLLCVVISLFHIASAEDPYKFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLISWNGIQQRRNSFEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDRGKKLPIPDGVLINGRGPNGLTFNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVASTRFSSKILTTTAVLRYSNSAGAVSGPPPGGPTIQVDWSLNQARSIRTNLTASGPRPNPQGSYHYGLIPTAKTIILASSSGQVNGKQRYAINSVSYVAPDTPLKLADYFKISGVFRVGSISDRPTGGGIYLDTSVLQADYRTFVEIVFQNNENIVQSYHLDGYQFWVVGMDGGQWTSSSRNNYNLRDAVARSTTQVYPYSWTAIYIALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARLCGRASGRHTRPL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05754 544 CDD CuRO_1_AAO_like_1 30 146 IPR034273 GO:0005507
Trre5g05754 544 Gene3D - 347 540 IPR008972 -
Trre5g05754 544 Pfam Multicopper oxidase 162 298 IPR001117 -
Trre5g05754 544 Gene3D - 160 335 IPR008972 -
Trre5g05754 544 SUPERFAMILY Cupredoxins 23 176 IPR008972 -
Trre5g05754 544 FunFam Monocopper oxidase-like protein 160 334 - -
Trre5g05754 544 FunFam L-ascorbate oxidase homolog 29 150 - -
Trre5g05754 544 FunFam Monocopper oxidase-like protein 346 543 - -
Trre5g05754 544 CDD CuRO_2_AAO_like_1 161 296 IPR034271 -
Trre5g05754 544 CDD CuRO_3_AAO_like_1 378 498 IPR034275 GO:0005507
Trre5g05754 544 PANTHER MULTI-COPPER OXIDASE 48 509 IPR045087 -
Trre5g05754 544 Gene3D - 29 150 IPR008972 -
Trre5g05754 544 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Trre5g05754 544 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Trre5g05754 544 Pfam Multicopper oxidase 380 516 IPR011706 GO:0005507|GO:0016491
Trre5g05754 544 SUPERFAMILY Cupredoxins 156 336 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05754 Trre-Chr5 57427619 57433775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05754 - - gmx:100815570 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05754 5 57427619 57433775 Trre5g05754 5 57427619 57433775 ECH
Trre1g00015 1 181878 184869 Trre5g05754 5 57427619 57433775 PCT