Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05749 ATGATAAGCATTTATGTTAAATGCTCTAAATTAAGTTGTTTATCCAAACAAAGCCTCAGATATCTTTTCATTTTTCAGGATAGTTTGGATGGAAAACCAGAGGTTTTGCTTGACCCCAATGGCTTAAGTGAAGATGGAACTGTATCGTTGAACACATTGTCGGTGAGTGAAGATGCCAAGTACTTGGCTTATGCACTTAGTACCAGTGGTAGCGATTGGACGACTATAAAAGTGAAGCGTATCGAGGATAAGAATGTTGAGCCTGATACTTTATCATGGGTTAAATTTTCCTCCATTAGTTGGACACATGATAACAAAGGTTTCTTTTATAGCCGCTATCCAACACCCAAAGATGGAGAAGTGGTAGATGCTGGGACTGAGACAAACTCTAACCTTTATCATATGCTCTATTATCATTTTCTGGGTATGGACCAATCACATGATATTTTGTGTTGGAAAGATCTTGAAAACCCTAAATATTCATTTGGAGGAACTGTTACCGATGATGGGAAGTATCTCCTCCTCTATATTGGAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGTGACATATCAAATCTTCCCAGCATACTGGAAACTTTTCGTAGTGAAAATTCCCCCCATCCTTTTGTCAAGCTTATTGATAATTTTGATGCAAAGTATGATTACATTGCAAATGATGACACTGTATTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAGGAACCAAACACATGGGGTGATATTCTCCAAGAGTCTGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATTGTAAGTTACTTGAGTGATGTGAAGCATCTTCTACAAGTAAGAGACTTAAAAACAGGTTCCTTGCTGCATCAACTGCCAATTGACATTGGCACAGTTTATGACATTTCTGCACGGCGTGAAGATAAAGTGGTTTTCATTAGCTTTACAAGCTTTCTATCTCCCGGTATTGTCTATCAGTGTAACCTGGAAACAGGAACTCCTGATCTGAAGATATTCCGTGAAATTGCGGTCCCCGGGTTTGATCGCTCTGAGTTTCATGTCAATCAGGTTTTTGTCCCTAGTAAAGATGGTACCAAGATCCCAATTTTCATTGTTGCGAAAAAGGATATTATTTTGGATGGTTCACACCCGTGTCTGTTATATGGATATGGTGGTTTTAACATCAGTATTACACCGTCCTTCAGTGTTAGTCGCATTGTGCTCACAAAACATTTAGGTTTTGTTTACTGCATTGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGTTCCCTTGCTAAAAAACAGAATTGCTTTGACGATTTCATTTCTGCAGCCGAATACCTTGTATCTACTGGTTATACCCAACCCAGAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTCGGTGCTTGTATAAATCAGAGACCTGATCTCTTTGGTTGCGCATTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAGTTTACCATAGGTCATGCTTGGACCTCAGATTATGGTTGTGCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAGTACTCACCATTGCATAATGTCCGGCGACCGTGGGAACAGCATCCTGACAAGTCAATTCAGTACCCAGCAACCATGTTGTTGACAGCAGATCATGATGATCGAGTTGTGCCACTACACTCATTGAAGCTCTTGGCGACCATGCAGTATGTGCTATGTAGTAGCTTGGAGAACAGTCCCCAGACCAACCCTATAATTGGTCGCATTGACTGCAAAGCTGGACATGGAGCGGGTCGTCCAACACAGAAAATGATTGACGAAGCTGCTGATCGGTTCAGTTTTATGGCAAAAATGTTAGGAGCGCAATGGATTGAATAG 1944 0.4059 MISIYVKCSKLSCLSKQSLRYLFIFQDSLDGKPEVLLDPNGLSEDGTVSLNTLSVSEDAKYLAYALSTSGSDWTTIKVKRIEDKNVEPDTLSWVKFSSISWTHDNKGFFYSRYPTPKDGEVVDAGTETNSNLYHMLYYHFLGMDQSHDILCWKDLENPKYSFGGTVTDDGKYLLLYIGEGCDPVNKLYYCDISNLPSILETFRSENSPHPFVKLIDNFDAKYDYIANDDTVFTFLTNKDAPKYKLVRVDLKEPNTWGDILQESEKDVLESACAVNGNQLIVSYLSDVKHLLQVRDLKTGSLLHQLPIDIGTVYDISARREDKVVFISFTSFLSPGIVYQCNLETGTPDLKIFREIAVPGFDRSEFHVNQVFVPSKDGTKIPIFIVAKKDIILDGSHPCLLYGYGGFNISITPSFSVSRIVLTKHLGFVYCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSTGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCADKEEEFHWLIKYSPLHNVRRPWEQHPDKSIQYPATMLLTADHDDRVVPLHSLKLLATMQYVLCSSLENSPQTNPIIGRIDCKAGHGAGRPTQKMIDEAADRFSFMAKMLGAQWIE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05749 647 Pfam Prolyl oligopeptidase family 412 643 IPR001375 GO:0006508|GO:0008236
Trre5g05749 647 PANTHER PROLYL ENDOPEPTIDASE 20 645 - -
Trre5g05749 647 ProSitePatterns Prolyl endopeptidase family serine active site. 459 489 IPR002471 GO:0004252|GO:0006508
Trre5g05749 647 Gene3D alpha/beta hydrolase 353 645 IPR029058 -
Trre5g05749 647 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 482 502 IPR002470 GO:0004252|GO:0006508
Trre5g05749 647 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 397 415 IPR002470 GO:0004252|GO:0006508
Trre5g05749 647 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 452 471 IPR002470 GO:0004252|GO:0006508
Trre5g05749 647 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 564 586 IPR002470 GO:0004252|GO:0006508
Trre5g05749 647 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 424 448 IPR002470 GO:0004252|GO:0006508
Trre5g05749 647 FunFam Prolyl endopeptidase 9 356 - -
Trre5g05749 647 Gene3D - 6 352 - -
Trre5g05749 647 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 26 349 IPR023302 GO:0004252
Trre5g05749 647 FunFam Prolyl endopeptidase 336 637 - -
Trre5g05749 647 SUPERFAMILY alpha/beta-Hydrolases 367 591 IPR029058 -
Trre5g05749 647 SUPERFAMILY Peptidase/esterase 'gauge' domain 16 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05749 Trre-Chr5 57406383 57410944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05749 392 529 Carbohydrate Esterase AT5G36210 28.571 5.25e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05749 K01322 - gmx:100776544 1126.31