Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05747 ATGAGTGCCATAAACGAACCTCTTCAATACCCCGCTGCTCGCAGAGACGACTCAATCGTCGACGACTATCACGGCGTCAAAATCGCCGACCCCTATCGATGGCTCGAAGATCCTGATGCTGAAGAAGTGAAAGAGTTTGTAGAGAAACAGGTTCAACTTACCAATTCAGTGATTCAAAAATGCGAAACAAGATCGAAGCTTAATGAAACTATCACTAAGCTATTTGATCATCCTCGTTATGATGCTCCTTTTAGAAGAGGCAATAAGTATTTTTACTTCCATAACACTGGTCTTCAGCCACAGGACATTCTCTATGTCCAGGATAGTTTGGATGGAAAACCAGAGGTTTTGCTTGACCCCAATGGCTTAAGTGAAGATGGAACTGTATCGTTGAACACATTGTCGGTGAGTGAAGATGCCAAGTACTTGGCTTATGCACTTAGTACCAGTGGTAGCGATTGGACGACTATAAAAGTGAAGCGTATCGAGGATAAGAATGTTGAGCCTGATACTTTATCATGGGTTAAATTTTCCTCCATTAGTTGGACACATGATAACAAAGGTTTCTTTTATAGCCGCTATCCAACACCCAAAGATGGAGAAGTGGTAGATGCTGGGACTGAGACAAACTCTAACCTTTATCATATGCTCTATTATCATTTTCTGGGTATGGACCAATCACATGATATTTTGTGTTGGAAAGATCTTGAAAACCCTAAATATTCATTTGGAGGAACTGTTACCGATGATGGGAAGTATCTCCTCCTCTATATTGGAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGTGACATATCAAATCTTCCCAGCATACTGGAAACTTTTCGTAGTGAAAATTCCCCCCATCCTTTTGTCAAGCTTATTGATAATTTTGATGCAAAGTATGATTACATTGCAAATGATGACACTGTATTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAGGAACCAAACACATGGGGTGATATTCTCCAAGAGTCTGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATTGTAAGTTACTTGAGTGATGTGAAGCATCTTCTACAAGTAAGAGACTTAAAAACAGGTTCCTTGCTGCATCAACTGCCAATTGACATTGGCACAGTTTATGACATTTCTGCACGGCGTGAAGATAAAGTGGTTTTCATTAGCTTTACAAGCTTTCTATCTCCCGGTATTGTCTATCAGTGTAACCTGGAAACAGGAACTCCTGATCTGAAGATATTCCGTGAAATTGCGGTCCCCGGGTTTGATCGCTCTGAGTTTCATGTCAATCAGGTTTTTGTCCCTAGTAAAGATGGTACCAAGATCCCAATTTTCATTGTTGCGAAAAAGGATATTATTTTGGATGGTTCACACCCGTGTCTGTTATATGGATATGGTGGTTTTAACATCAGTATTACACCGTCCTTCAGTGTTAGTCGCATTGTGCTCACAAAACATTTAGGTTTTGTTTACTGCATTGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTCGGTGCTTGTATAA 1641 0.3998 MSAINEPLQYPAARRDDSIVDDYHGVKIADPYRWLEDPDAEEVKEFVEKQVQLTNSVIQKCETRSKLNETITKLFDHPRYDAPFRRGNKYFYFHNTGLQPQDILYVQDSLDGKPEVLLDPNGLSEDGTVSLNTLSVSEDAKYLAYALSTSGSDWTTIKVKRIEDKNVEPDTLSWVKFSSISWTHDNKGFFYSRYPTPKDGEVVDAGTETNSNLYHMLYYHFLGMDQSHDILCWKDLENPKYSFGGTVTDDGKYLLLYIGEGCDPVNKLYYCDISNLPSILETFRSENSPHPFVKLIDNFDAKYDYIANDDTVFTFLTNKDAPKYKLVRVDLKEPNTWGDILQESEKDVLESACAVNGNQLIVSYLSDVKHLLQVRDLKTGSLLHQLPIDIGTVYDISARREDKVVFISFTSFLSPGIVYQCNLETGTPDLKIFREIAVPGFDRSEFHVNQVFVPSKDGTKIPIFIVAKKDIILDGSHPCLLYGYGGFNISITPSFSVSRIVLTKHLGFVYCIANIRGGGEYGEEWHKAESYASKVEAMVDFLSVLV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05747 546 FunFam Prolyl endopeptidase 78 437 - -
Trre5g05747 546 PANTHER PROLYL ENDOPEPTIDASE 6 544 - -
Trre5g05747 546 Pfam Prolyl oligopeptidase family 493 544 IPR001375 GO:0006508|GO:0008236
Trre5g05747 546 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 11 430 IPR023302 GO:0004252
Trre5g05747 546 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 505 529 IPR002470 GO:0004252|GO:0006508
Trre5g05747 546 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 478 496 IPR002470 GO:0004252|GO:0006508
Trre5g05747 546 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 533 546 IPR002470 GO:0004252|GO:0006508
Trre5g05747 546 SUPERFAMILY alpha/beta-Hydrolases 448 544 IPR029058 -
Trre5g05747 546 SUPERFAMILY Peptidase/esterase 'gauge' domain 6 435 - -
Trre5g05747 546 Gene3D alpha/beta hydrolase 434 545 IPR029058 -
Trre5g05747 546 Gene3D - 78 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05747 Trre-Chr5 57398919 57402600 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05747 K01322 - gmx:100776544 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05747 5 57398919 57402600 Trre5g05747 5 57398919 57402600 ECH
Trre1g00018 1 194172 197692 Trre5g05747 5 57398919 57402600 PCT