Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05735 ATGTATATGGGAGATACAGAGAGTTGTTGTAATAGCAAACTAGTTTTTGGTTCTGAATGGAATCAAAATGGAAAGGAGAGGCAGAAGATTGAAGTTTACATCAAAGTTCTTAATCGACTTAGGGAATTGAATGTCCCTGAGGCTATGGTTTCTGGTTTTGACGATGATCTTTGGGCGCACTTCCATCGCCTTCCCACTAGGTATGCATTGGATATGAATGTTGAGAGGGCCCAATATGTTCTTATGCATAAAAGATTACTGCATATTGCAAGAACCTCAGCTACAGCAACTGGACCTGCACTCGAAGTCCGTCTTGTACAGGTTCGTTCTGCTTCTGAAGAGAGTACTTGTAGTAAATCCCTTCATTCAAACTCGCAAAGTGAAGTTAGTCCTCAAGATTCTGATATTCATGGCAAAATGATGAGGTACATGCATGAAATTACAATTTCAACAAATGACAAGCCAAAACTTCTTAGTCAGTTGACTTCCTTACTGTCTGAGACTGGGCTCGACATTCAAGAAGCACATGCTTTTTCGACATTGGATGGCTATTCGTTAGATGTTTTCGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAAAAGTTAAAGCATGTACTAGCTAAGAAAGTTCTGAAACTTGAGGAGCGGTCTCGGTTGAAAGAAAATGGCAGTCTTCCTCATGCAGAGCAAGAGAAAATTAGGATGAACATTATATCTAGACATGTAATTATTCCCAATCCTGAAAATGGTGTCTCGACGTGTGAACCAAGTTGGTTTAGATTTGAAAAGAAAATTGCATCTGGACTCTTCAGTGATTTGTACAAAGGTACATTATGTAATCAAGATGTAGCTATCAAAATCCTTAAGCAAGAAAGTTTGAATGAGAATATACAAAAGGAGTTTTCTCAGGAAGTCTATATCCTAAGTAAAATTCATCACCAAAATGTTGTCAAATTTATCGGTGCTGGTACAAAACCCCCAAACCTTTACCTTGTCACAGAATATTTGTCTGGTGGAAGTATTTACGACCTATTGCATAAAGGGAACACCGTCCTTACTCTTCCATCTTTGCTCAAAATAGCCATCGACGTTTCTGAAGGAATGAAATATTTACATCAGAATGATATCATACATCGGGACCTCAAGTCAGCTAATCTTTTGATAGATAAGACCGGGGTCGTTAAGGTTGCTGATTTTGGTGTAGCCAGAGTGCGTAATCAGTCTGGTATAATGACTGCGGAGACTGGAACTTATCGGTGGATGGCTCCGGAGGTTATTGAGCATAAGCCTTACGATCACAAAGCCGATGTCTTTAGCTTTGCAATTGTTCTCTGGGAGCTGCTTACAGGAAAGCTTCCCTATGAGCTTTTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCACAAGGGTTTAAGGCCTAAAATTCCAAAGCATACTCATCCAAAGTTGGTGGAATTGCTTCAGTGGTGTTGGCACCAAGATCCATCTTTGAGACCTAATTTTTCAGAAATTCTAGAATTTCTGCTGCATATTTTTAAGATGGTATGTAAGGGAGAATCTTGA 1563 0.4005 MYMGDTESCCNSKLVFGSEWNQNGKERQKIEVYIKVLNRLRELNVPEAMVSGFDDDLWAHFHRLPTRYALDMNVERAQYVLMHKRLLHIARTSATATGPALEVRLVQVRSASEESTCSKSLHSNSQSEVSPQDSDIHGKMMRYMHEITISTNDKPKLLSQLTSLLSETGLDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKHVLAKKVLKLEERSRLKENGSLPHAEQEKIRMNIISRHVIIPNPENGVSTCEPSWFRFEKKIASGLFSDLYKGTLCNQDVAIKILKQESLNENIQKEFSQEVYILSKIHHQNVVKFIGAGTKPPNLYLVTEYLSGGSIYDLLHKGNTVLTLPSLLKIAIDVSEGMKYLHQNDIIHRDLKSANLLIDKTGVVKVADFGVARVRNQSGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTGKLPYELLSPLQAAVGVVHKGLRPKIPKHTHPKLVELLQWCWHQDPSLRPNFSEILEFLLHIFKMVCKGES 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05735 520 ProSiteProfiles Protein kinase domain profile. 259 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05735 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Trre5g05735 520 Gene3D Transferase(Phosphotransferase) domain 1 338 517 - -
Trre5g05735 520 FunFam serine/threonine-protein kinase STY46-like 255 337 - -
Trre5g05735 520 ProSiteProfiles ACT domain profile. 146 227 IPR002912 -
Trre5g05735 520 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 122 508 - -
Trre5g05735 520 PRINTS Tyrosine kinase catalytic domain signature 370 388 IPR001245 GO:0004672|GO:0006468
Trre5g05735 520 PRINTS Tyrosine kinase catalytic domain signature 435 457 IPR001245 GO:0004672|GO:0006468
Trre5g05735 520 PRINTS Tyrosine kinase catalytic domain signature 416 426 IPR001245 GO:0004672|GO:0006468
Trre5g05735 520 PRINTS Tyrosine kinase catalytic domain signature 479 501 IPR001245 GO:0004672|GO:0006468
Trre5g05735 520 PRINTS Tyrosine kinase catalytic domain signature 333 346 IPR001245 GO:0004672|GO:0006468
Trre5g05735 520 CDD STKc_MAP3K-like 265 508 - -
Trre5g05735 520 SUPERFAMILY Protein kinase-like (PK-like) 252 508 IPR011009 -
Trre5g05735 520 SUPERFAMILY ACT-like 141 209 IPR045865 -
Trre5g05735 520 Coils Coil 196 216 - -
Trre5g05735 520 Gene3D Phosphorylase Kinase; domain 1 255 337 - -
Trre5g05735 520 Pfam Protein tyrosine and serine/threonine kinase 260 508 IPR001245 GO:0004672|GO:0006468
Trre5g05735 520 SMART serkin_6 259 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05735 Trre-Chr5 57296791 57301004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05735 5 519 MAP Kinase Kinase Kinase AT4G35780 53.818 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trre5g05735 PK_Tyr_Ser-Thr 7.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05735 - - gmx:100818047 710.679