Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05708 ATGAAACTAAATCAACTTTTGTTAATACTATCATTTGAATTTCTCTTCATTTTTCTTGGAGAGTCAAGATCATCCTTAACTGATCATATCACTCAATCAGAAAATGACAATCAAGTTTATATTGTGTATATGGGAGCTGCTCATTCAACTAATGGTTCCCTTCGCAAAGATCATGAATATATTTTAAACTCAGTGTTAAGAAGGAACAAAAAGGCTTTAGTACACAACTACAAATATGGATTCTCAGGCTTCGCAGCTCATTTATCGAAAGACGAAGCAAACTCAATCGCGCAGCAGCCTGGAGTTGTGTCTGTGTTCCCAAATCCCATTCTAAAACTTCACACAACACGTTCTTGGGATTTTCTAAAGTTGCAAACTCAAGTTAAAATTGATAGCACGTTCTCTGGTTCTTCTTCTTCTTCTTCTTCCTCATCGAACGTCGTAATTGGCTTATTAGATACAGGTATATGGCCAGAATCAGAAAGTTTTTCGGACAATGGAATGGATCCTATTCCATCTGGTTGGAAAGGGACTTGCATGACATCACAGGACTTCAACACATCCAACTGTAATAGGAAGATAATTGGAGCAAGATATTACCCCGGCCGCGGCGTTGGTGTGGTAGACACAGTAAGAGATAACCAAGGACATGGAACACACACATCATCGACGGCGGCAGGGAATGTTGTAAGTGGGGCATCATACTACGGTCTTGCGACCGGAACAGCAAAAGGTGGTTCTCCTGAGTCGAGGTTGGCAATTTACAATGTATGCAACGGTGGTTGTTCTGGCGCTAACATCCTTGCAGCGTATGACGATGCAATTTCTGATGGAGTTGATGTCCTTTCTCTCTCCCTTGGAGGGGATCCGGATCCCAACCCTGACTTGACAACAGATGTGATTGCAATTGGAGCTTTCCATGCTGTGGAGCGCGGCATCCTTGTGGTTTGCTCCGCTGGAAATGATGGACCAGACAAGGGTTTGGTTGTTAACGACGCTCCTTGGATATTAACCGTTGGTGCCACCACCATTGACCGTAGCCTTCAATCCAACATTGTCTTGGGTAACAACAAAGTTGTCGAGGGTCAAGCTATAAATTTCTCTAATCTTTCAAAATCTGCGGATTATCCATTGATAACCGGAGAATCTGCCAAAGCAGCTAAGGCTGACTTAGCAGAAGCAAGACAGTGTCATCCAGATTCATTGGATAAGAAAAAAGTCAAAGGAAAAATTGTCATTTGCGATGGCATTAATGATTTTTATGGAACCATTATAAAAATGGATACAGTGAAAGAGGTGGGTGGAATAGGTCTTGTTCATATCACTGACCTCCAAGGAGCATTGGTAGAAAATTATAAAGACTTCCCAGCAACAATTGTAAGATCAAAAAATGCTGCCACACTCCTCCAATATGTCAATTCAACAAGCAATCCAGTAGGAACAGTTCTACCAACAGTTACAGTCATGGATTATAAACCTGCACCTATGGTGGCAATCTTTTCAAGTAGAGGACCTTCCGCGCTTTCAAAGAATATTATCAAGCCTGATATTGCAGCACCGGGTGCTAACATTATTGCATCATGGACTGGCATGCACGATGACTTCGATTATATTCCAAAAGGGGAAACGTTCTCACCGTATAACATTATCTCAGGAACTTCCATGTCATGCCCCCATGTTTCAGGCCTTGCAGGCAGCATTAAATCTAGAAATCCAACTTTGAGTCCCGCTGCAATCAAATCAGCAATCATGACCTCTGCAACTCAAATTGACAATACGAAGGCTCCCATTACAACGGATTTAGGGTCGGTTGCCACACCTTATGACTATGGAGCAGGGGAAATAACAATAACTGAATCATTCCAGCCGGGGCTAGTTTATGAAACCACCACCATCGACTACTTGAACTACTTGTGTTACATAGGACTCAACACACCCACAATTAAGATTATCTCCCAAACTGTTCCGAAAAATTTCAGCTGCCCGAAAGACTCTACTCCTGATCATATTTCCAACATCAACTATCCTTCCATAGCAATTTCCGAATTCACCGGCAAAGAAACTGTAAAAGTGAGTAGAACTGTTACAAATATCGGTGAAGAGGATGAAACAGTCTATTCTGCTATCGTCGATGCTCCTAACGGAGTGAAAGTCCAGTTGATTCCAGAGAAACTTGAATTCACAAAAAGTAGCAAAACAATAAGCTACCAAGTTGTTTTCTCCTCCACTTTAACCTCATTGAAGAAAGATCTGTTTGGATCCATTACTTGGAGTAATGGTAAACATAGTGTTCGAAGTCCTTTTGTATTAACTGTGTAG 2319 0.4161 MKLNQLLLILSFEFLFIFLGESRSSLTDHITQSENDNQVYIVYMGAAHSTNGSLRKDHEYILNSVLRRNKKALVHNYKYGFSGFAAHLSKDEANSIAQQPGVVSVFPNPILKLHTTRSWDFLKLQTQVKIDSTFSGSSSSSSSSSNVVIGLLDTGIWPESESFSDNGMDPIPSGWKGTCMTSQDFNTSNCNRKIIGARYYPGRGVGVVDTVRDNQGHGTHTSSTAAGNVVSGASYYGLATGTAKGGSPESRLAIYNVCNGGCSGANILAAYDDAISDGVDVLSLSLGGDPDPNPDLTTDVIAIGAFHAVERGILVVCSAGNDGPDKGLVVNDAPWILTVGATTIDRSLQSNIVLGNNKVVEGQAINFSNLSKSADYPLITGESAKAAKADLAEARQCHPDSLDKKKVKGKIVICDGINDFYGTIIKMDTVKEVGGIGLVHITDLQGALVENYKDFPATIVRSKNAATLLQYVNSTSNPVGTVLPTVTVMDYKPAPMVAIFSSRGPSALSKNIIKPDIAAPGANIIASWTGMHDDFDYIPKGETFSPYNIISGTSMSCPHVSGLAGSIKSRNPTLSPAAIKSAIMTSATQIDNTKAPITTDLGSVATPYDYGAGEITITESFQPGLVYETTTIDYLNYLCYIGLNTPTIKIISQTVPKNFSCPKDSTPDHISNINYPSIAISEFTGKETVKVSRTVTNIGEEDETVYSAIVDAPNGVKVQLIPEKLEFTKSSKTISYQVVFSSTLTSLKKDLFGSITWSNGKHSVRSPFVLTV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05708 772 Gene3D - 638 772 - -
Trre5g05708 772 Pfam Fibronectin type-III domain 672 769 IPR041469 -
Trre5g05708 772 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Trre5g05708 772 FunFam subtilisin-like protease SBT1.5 345 489 - -
Trre5g05708 772 Pfam Subtilase family 144 613 IPR000209 GO:0006508|GO:0008236
Trre5g05708 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 769 IPR045051 -
Trre5g05708 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Trre5g05708 772 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Trre5g05708 772 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Trre5g05708 772 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Trre5g05708 772 SUPERFAMILY Subtilisin-like 113 623 IPR036852 GO:0004252|GO:0006508
Trre5g05708 772 Gene3D Peptidase S8/S53 domain 146 634 IPR036852 GO:0004252|GO:0006508
Trre5g05708 772 ProSiteProfiles Serine proteases, subtilase domain profile. 118 621 - -
Trre5g05708 772 FunFam Subtilisin-like protease SBT5.3 28 114 - -
Trre5g05708 772 CDD Peptidases_S8_3 111 588 IPR034197 -
Trre5g05708 772 Gene3D - 345 489 - -
Trre5g05708 772 FunFam Subtilisin-like protease SBT1.5 146 356 - -
Trre5g05708 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Trre5g05708 772 CDD PA_subtilisin_like 351 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05708 Trre-Chr5 57127626 57133813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05708 40 771 Subtilisin-like Serine Gene Family AT1G20150 52.477 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05708 K25898 - gmx:100820194 1036.17