Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05707 ATGAAACTAAATCAATTTTTGTTAATACTATCATTTGAATTTCTCTTCATTTTTCTTGGAGAGTCAAGATCATCCTTAACTGATCATATCACTCAATCAGAAAATGACAATCAAGTTTATATTGTTTATATGGGAGCTGCTCATTCAACTAATGGTTCCCTTCGCAAAGATCATGAATATGTTTTAAACTCAGTGTTAAGAAGGAACAAGAAAGCTCTAGTACACAACTATAAATATGGATTGTCAGGCTTTGCAGCTCGTTTATCAAAAGACGAAGCAAACTCAATCGCGCAACAATCTGGAGTTGTGTCTGTGTTTCCAAATCCCACTCTAAAGCTACACACAACACGTTCTTGGGATTTTTTGAAGTTGCAAACTCATATTAAACTTGATAGCACATTCTCCAATTCTTCTTCTTCTTCTTCTTCTTCTTCATCTGATGTTGTAATTGGCATGATAGATACAGGTATATGGCCAGAAGCAGAAAGTTTTTCAGACAATGGAATGAATCCTATTCCAGCTGGTTGGAAAGGCACTTGCATGACTTCACATGACTTCAACACATCCAACTGTAATAGGAAGATAATAGGAGCAAGGTATTATTCTGACGATCCAAATGATGACGAGAAAAACACAGTTAGAGATAAAAATGGACATGGAACACACACAGCGTCGACGGCGGCAGGGAATGTTGTCAGTGGGGCATCATACTACGGCCTTGCGACAGGAACAGCAAAAGGTGGGTCCCCTGAATCGAGGTTGGCGATTTACAAAGTGTGCTCTGCTGGTGGATGTTCTGGCGCTAGCATTCTTGCAGCATTCGACGATGCAATTTCTGATGGAGTTGATGTACTTTCTCTCTCCATTGGAGCGTCTATGGGTCCCAACCCTGACTTGACAAAAGATGTGATTGCAATTGGAGCTTTCCATGCTGTGGAGCGCGGCATCCTTGTGGTTTGCGCCGCTGGAAATGACGGTCCAGGGCAGAGTACGGTTACTAACGACGCTCCTTGGATATTAACCGTTGGTGCCACCACCATTGACCGCAGCTTTCAATCCAACATCGTCTTGGGTAATAACAAAGTTGTCGAGGGTCAAGCTATAAATTTCTCTCCTCTTTCAAAATCTGCCGATTATCCATTGATAACCGGAGAGTCTGCCAAAGTAGCTAAGGTTGACTTAGACGAAGCAAGACAATGTCATTCAGATTCATTAGATAAGAATAAAGTCAAAGGAAACATTGTCATTTGCGATGGCATAAATGATGTTTATTATTCAACCGATTATAAAATTGGCGTTGTACGAGATTTGGGTGGATTAGGTCTTGTTCATATTACTGACAGAGAAGGAGCAGTGGCAAATAATTATGGAGACTTCCCAGCAACAATTGTAAGACCAAAAGATGATGCCACAATCCTTCAGTATGTTAATTCAACAAGTAATCCAAAGGCAACAATTCTACCAACAACTACAGTCATAGATTATAAGCCTGCACCTATGGTGTCATTCTTTTCAAGTAGAGGGCCTTCCGTGCTTTCAAAGAATATTATCAAGCCTGATATTGCAGCACCAGGTGCTGCCATTCTTGCAGCATGGACCGGCGTGCTTACTGAGGACACTATTGTTCCAAAAGGGAAAAAGCCATCACCATATAACATTATATGGGGAACTTCAATGTCATGTCCCCATGTTTCAGGCCTTGCTGCCAGCATTAAATCTAGAAATCCAACATGGAGCCCCTCTGCAATCAAATCAGCTATCATGACCTCTGCAACTCAAATTAACAATATGAAGGCTCCAATTACAACGGATTTAGGATCAGTTGCCACTCCTTATGACTATGGAGCAGGAGAAATAACAACAACTGAATCATTCCAGCCGGGGCTAGTTTATGAAACCACCATCATCGACTACTTCAACTACTTGTGTTACAAAGGACTCAACACAACCACAATTAAGGTTGTCTCTAAAACTGTTCCGAAAAATTTCAGCTGCCCCAAGGACTCTACTCCTGATCATATTTCCAATATCAACTATCCTTCCATTGCAATTTCAAAATTCACCGGCAAAGAAATTGTGAATGTGAGTAGAACTGTTACAAATATCGGTGAAGAGGATGAAACAGTCTATTCTGCTATCGTCGATGCTCCTAACGGAGTGAAAGTTCAGTTGATTCCAGAGAAACTTGAATTCACAAAAAGTAGCAAAACAGTTAGCTACCAAGTTGTTTTCTCTTCCACTTTAACCTCATTGAAGAAAGATCTGTTTGGATCCATTACTTGGAGTAATGGTAAACATAGTGTTCGAAGTCCTTTTGCATTAACTGTGTAG 2331 0.4058 MKLNQFLLILSFEFLFIFLGESRSSLTDHITQSENDNQVYIVYMGAAHSTNGSLRKDHEYVLNSVLRRNKKALVHNYKYGLSGFAARLSKDEANSIAQQSGVVSVFPNPTLKLHTTRSWDFLKLQTHIKLDSTFSNSSSSSSSSSSDVVIGMIDTGIWPEAESFSDNGMNPIPAGWKGTCMTSHDFNTSNCNRKIIGARYYSDDPNDDEKNTVRDKNGHGTHTASTAAGNVVSGASYYGLATGTAKGGSPESRLAIYKVCSAGGCSGASILAAFDDAISDGVDVLSLSIGASMGPNPDLTKDVIAIGAFHAVERGILVVCAAGNDGPGQSTVTNDAPWILTVGATTIDRSFQSNIVLGNNKVVEGQAINFSPLSKSADYPLITGESAKVAKVDLDEARQCHSDSLDKNKVKGNIVICDGINDVYYSTDYKIGVVRDLGGLGLVHITDREGAVANNYGDFPATIVRPKDDATILQYVNSTSNPKATILPTTTVIDYKPAPMVSFFSSRGPSVLSKNIIKPDIAAPGAAILAAWTGVLTEDTIVPKGKKPSPYNIIWGTSMSCPHVSGLAASIKSRNPTWSPSAIKSAIMTSATQINNMKAPITTDLGSVATPYDYGAGEITTTESFQPGLVYETTIIDYFNYLCYKGLNTTTIKVVSKTVPKNFSCPKDSTPDHISNINYPSIAISKFTGKEIVNVSRTVTNIGEEDETVYSAIVDAPNGVKVQLIPEKLEFTKSSKTVSYQVVFSSTLTSLKKDLFGSITWSNGKHSVRSPFALTV 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05707 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Trre5g05707 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Trre5g05707 776 ProSiteProfiles Serine proteases, subtilase domain profile. 118 626 - -
Trre5g05707 776 Gene3D Peptidase S8/S53 domain 147 638 IPR036852 GO:0004252|GO:0006508
Trre5g05707 776 SUPERFAMILY Subtilisin-like 113 624 IPR036852 GO:0004252|GO:0006508
Trre5g05707 776 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Trre5g05707 776 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Trre5g05707 776 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Trre5g05707 776 Gene3D - 642 776 - -
Trre5g05707 776 Gene3D - 348 493 - -
Trre5g05707 776 CDD Peptidases_S8_3 111 592 IPR034197 -
Trre5g05707 776 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Trre5g05707 776 CDD PA_subtilisin_like 354 486 - -
Trre5g05707 776 Pfam Subtilase family 145 617 IPR000209 GO:0006508|GO:0008236
Trre5g05707 776 Pfam Fibronectin type-III domain 676 773 IPR041469 -
Trre5g05707 776 MobiDBLite consensus disorder prediction 202 217 - -
Trre5g05707 776 FunFam Subtilisin-like protease SBT1.5 147 358 - -
Trre5g05707 776 FunFam subtilisin-like protease SBT1.5 348 493 - -
Trre5g05707 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 773 IPR045051 -
Trre5g05707 776 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05707 Trre-Chr5 57120873 57123945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05707 40 775 Subtilisin-like Serine Gene Family AT1G20150 51.872 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05707 K25898 - gmx:100820194 1065.83