Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05705 ATGACTTCACATGACTTCAACACAACCAACTGTAATAGGAAGATAATAGGAGCAAGGTATTACCATGACGTGACAAACACAGTAAGAGATAACGATGGACATGGAACACACACATCGTCGACGGCAGCAGGGAATATCGTGAGTGGGGCATCGTACTACGGTCTTGCAACCGGAACAGCAAAAGGCGGGTCTCCTGAATCGAGGTTGGCGATTTACAAAGTGTGCTCTGGTGATGAATGTCCTGGCTCTAGCATCCTTGCAGCATTCGATGATGCAATTTCCGATGGAGTTAATGTGCTTTCTCTCTCCCTTGGATTGCCTCCGGATCCCAAACCTGACTTGACAAAAGATGCAGTTGCAATTGGAACTTTCCATGCTGTGGAGCGCGGCATCCTGGTGGTTTGCTCCGCTGGAAATGCCGGACCAGAGCATGGTTTCGTTGTTAACGACGCTCCTTGGATATTAACCGTTGGTGCCACCACCATTGACCGCAGCCTTCAATCCAACATCGTCTTGGGTAATAACAAAGTTGTCAAGGGTCAAGCTATAAATTTCTCCCCTCTTTCTAAATCTGCTGATTATCCATTGATAACCGGAGAGTCTGCCAAAGCAACTAAGGCTGACTCAGCAGAAGCAAGACAATGTCAGCCAAATTCATTGGATAAGAAAAAAGTCAATGGAAGCATTGTCATTTGCGATGGCATAAATGGTGTTGATTATTCAACCGGTGAAAAATTTGCTATTGTACAAGCTTTGGGTGGAATAGGTCTTGTTCATATTACTGATCAGAGAGGAGCAGTGGCAGATAATTATGGAGACTTCCCAGCAACAATTGTTAGACCAAAAGATGATGCCACAATCCTCCGGTATGTAAATTCAACAAGCAATCCAATGGCAACAATTCTACCAACAACTACAGTCTTAGATTATAAGCCTGCACCTATGGTGGCATTCTTTTCAAGTAGAGGGCCTTCAGCACTTTCAAAGAATATTATCAAGCCTGATATTGCAGCACCAGGTGCTGACATTCTTGCAGCATGGACTGGCATGCCTAATGACGAAACTATTGTTCCAAAAGGGAAAAAACTCTCGCCATATAACATTATATCCGGAACTTCCATGTCATGCCCTCATGTTTCAGGCCATGCAGCTAGCATTAAATCTAGAAACCCAACTTGGAGTCCCTCTGCAATCAAATCAGCTATCATGACTTCTGCAACTCAAATTAACAATATCAATGCTCCCATTACAACGGATTTAGAGTCGGTTGCCACACCTTATGACTATGGAGCAGGGGAAATAACAATAACTGAATCATTCCAGCCGGGTCTAGTTTATGAAACCACCACCATCGACTACTTGAACTACTTGTGTTACATAGGACTCAACACAACAACAATTAAGATTATCTCCAAAACTGTTCCGAAAAATTTCAGCTGCCCCAAGGACTCTACTCCTGATCATATTTCCAAAATCAACTATCCTTCCATAGCAATTTCCGAATTCACCGGCAAAGAAATTGTGAATGTGAGTAGAACTGTTACAAATATCGGTGAAGAGGATGAAACAGTCTACTCTGCTATAGTTGATGCTCCCAATGGGGTGAAAGTGCAGTTAATTCCAGAGAAACTTCAATTCACAAAAAGTAGCAAAACAGTAACCTACCAAGTTATTTTCTCCTCCACTTTAACCTCATTGAAGGAAAATCTTTTTGGATCCATTACTTGGAGTAATGGTGAACATAGGGTTCGAAGTCCTTTTGTATTAACTGTGTAG 1776 0.4251 MTSHDFNTTNCNRKIIGARYYHDVTNTVRDNDGHGTHTSSTAAGNIVSGASYYGLATGTAKGGSPESRLAIYKVCSGDECPGSSILAAFDDAISDGVNVLSLSLGLPPDPKPDLTKDAVAIGTFHAVERGILVVCSAGNAGPEHGFVVNDAPWILTVGATTIDRSLQSNIVLGNNKVVKGQAINFSPLSKSADYPLITGESAKATKADSAEARQCQPNSLDKKKVNGSIVICDGINGVDYSTGEKFAIVQALGGIGLVHITDQRGAVADNYGDFPATIVRPKDDATILRYVNSTSNPMATILPTTTVLDYKPAPMVAFFSSRGPSALSKNIIKPDIAAPGADILAAWTGMPNDETIVPKGKKLSPYNIISGTSMSCPHVSGHAASIKSRNPTWSPSAIKSAIMTSATQINNINAPITTDLESVATPYDYGAGEITITESFQPGLVYETTTIDYLNYLCYIGLNTTTIKIISKTVPKNFSCPKDSTPDHISKINYPSIAISEFTGKEIVNVSRTVTNIGEEDETVYSAIVDAPNGVKVQLIPEKLQFTKSSKTVTYQVIFSSTLTSLKENLFGSITWSNGEHRVRSPFVLTV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05705 591 Gene3D Peptidase S8/S53 domain 7 453 IPR036852 GO:0004252|GO:0006508
Trre5g05705 591 ProSitePatterns Serine proteases, subtilase family, serine active site. 371 381 IPR023828 -
Trre5g05705 591 Gene3D - 457 591 - -
Trre5g05705 591 Pfam Fibronectin type-III domain 492 588 IPR041469 -
Trre5g05705 591 PRINTS Subtilisin serine protease family (S8) signature 30 43 IPR015500 -
Trre5g05705 591 PRINTS Subtilisin serine protease family (S8) signature 370 386 IPR015500 -
Trre5g05705 591 Gene3D - 163 308 - -
Trre5g05705 591 FunFam subtilisin-like protease SBT1.5 163 308 - -
Trre5g05705 591 ProSiteProfiles Serine proteases, subtilase domain profile. 1 440 - -
Trre5g05705 591 CDD PA_subtilisin_like 169 301 - -
Trre5g05705 591 SUPERFAMILY Subtilisin-like 8 442 IPR036852 GO:0004252|GO:0006508
Trre5g05705 591 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 588 IPR045051 -
Trre5g05705 591 Pfam Subtilase family 19 432 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05705 Trre-Chr5 57113447 57116212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05705 7 590 Subtilisin-like Serine Gene Family AT1G20150 51.667 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05705 K25898 - gmx:100820194 831.247