Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05703 ATGAAAGCAAATCCATTTTTATTGATACTAATATTTTACTATCTCTTCATTTTTCTTGGAGAGCCAAGATTATCTTCAGCTGATCACATCACTCAATCAGAGAATGACAATCAAGTTTATATTGTTTATATGGGAGCTGCTGATTCAACTAATGGTTCCATTCGCAAAGATCATGCCCATGTTTTAAACACAGTGTTAAGAAGGAATGAGAAGGCTCTAATACATAATTACAAACACGGTTTTTCGGGCTTCGCAGCCCGTTTATCGAAAAGTGAAGCAAATTCAATTGCTCAGCAACCTGGAGTTGTGTCTGTGTTCCCTGATCCCATTCTAAATCTCCATACAACACATTCTTGGGATTTTCTCAAGTTGCAAACTCAAGTCAAAATTGACGACACCCTCTCCAATTCATCTTCATCGGACATTGTAATTGGCATGTTAGACACAGGTATATGGCCAGAAGCTGCAAGTTTTTCGGACAATGGAATGAATCCTATTCCACCCAATTGGAAAGGCACTTGCATGACATCAAATGACTTCAACTCATCTAACTGTAACAGGAAGATAATAGGAGCAAGGTATTACCCTAACCAGAATACGGATGATGCCTCGGTAAGGGATACATATGGACATGGAACCCACACAGCGTCTACGGCGGCAGGGAAAGTCGTGAGTGGTGCATCGTACTATGGTCTAGTGGAAGGGACAGCAAAAGGCGGGTTTCCTGAATCGAGGTTGGCAATTTACAAAGTGTGCTATCCTTCTTGTTATGGTTCTGGCATCCTTGCAGCATTTGACGATGCCATTTCTGATGGAGTTGATGTGCTTTCTCTCTCACTCGGTGCATCTCCATTTTTTCGACCAAACTTGACATCTGACCCAATTGGAATTGGAGCATTTCACGCTGTGGAGCACGGCATTATTGTAGTCTGCTCAGCTGGGAATTCTGGACCCAAACAAATGACGGTTGTTAACGACGCTCCTTGGATATTAACTGTTGCAGCCACCACCATCGATCGTGATCTTCAATCCAATGTTGTCTTGGGTAATGACAAAGTTGTCAAGGGCGAAGCTATAAATTTCTCACCTCTTTCAAAATCTGCTGATTATCCATTGATAACTGGAGAGTCTGCAAAGACAACTACAGCTGACTTAGCTGAAGCAAGACAATGTCACTCAAGTTCATTAGATAAGAATAAAGTCAAAGGAAAGATTGTTGTATGCGATGGTATAGATGATCATCAAACAACTTTTGCAAAAATTGATACAGTGAAAGAGGTGGGTGGATTAGGTCTTGTTCATATTACCGACAAAGAAGGAGCAGTGGCAAATAACTATGTAGACTTCCCAGCAACTGTGGTACGATCGAAAGATGCTACCACAATCCTCCAATATGTCAATTCAACAAGCAATCCAGTAGCAACAATTCTACCAACAGTCACAGTCATGGATTATAAACCTGCACCTATGGTGGCAATCTTTTCAAGTAGAGGACCTTCGGGACTTTCAAAGAATATTCTAAAACCTGATATTGCAGCACCAGGTGTTGCCATTGTTGCAGCATGGATTGAAAATAATGATGTAGAAGATATTCCAAAAGGGAAAAAACCATCACCATATAACATTTTATCAGGGACTTCCATGTCATGCCCTCATGTTTCAGGCCTTGCAGGCAGCATTAAATCTAGAAACCCAACTTGGAGTGCCTCTGCAATCAAATCAGCTATCATGACCTCTGCAACTCAAATTAACAATATGAAGGCTCCCATTACGACAGATTTAGGGTCAGTTGGCACACCTTATGACTATGGAGCAGGGGAAATAACAACAACTGAATCATTTCGACCGGGGCTAGTTTATGAAACCAACACCATTGACTACTTGAACTACTTGTGTTACATCGGACTCAACACAACCACGGTTAAGGTTATATCTAAAACTGTCTCTGATAGTTTCAGTTGCCCCGAAGATTCAACTCCTGATCATGTTTCCAACATCAATTACCCTTCCATAGCAATCTCCAACTTCACTAGTAAAGGAACTGTGAATGTGAGTAGAACTGTTACAAACGTTGGTGAAGAGGATGAAACAGTTTACTCTGTCATCATTGATGCTCCCAATGGGGTGAAACTCCAATTGATTCCAGAGAAATTGGAGTTTACAAAAAGTAGTAAAAAACAAAGCTACCAAGTTATTTTCTCCTCTACTTCATCCTCTGTGAAGGAAGATCTGTTTGGATCTATAACCTGGAGTAATGGTAAATATAATGTTCGAAGTCCTTTTATATTAACTGTGTAG 2298 0.406 MKANPFLLILIFYYLFIFLGEPRLSSADHITQSENDNQVYIVYMGAADSTNGSIRKDHAHVLNTVLRRNEKALIHNYKHGFSGFAARLSKSEANSIAQQPGVVSVFPDPILNLHTTHSWDFLKLQTQVKIDDTLSNSSSSDIVIGMLDTGIWPEAASFSDNGMNPIPPNWKGTCMTSNDFNSSNCNRKIIGARYYPNQNTDDASVRDTYGHGTHTASTAAGKVVSGASYYGLVEGTAKGGFPESRLAIYKVCYPSCYGSGILAAFDDAISDGVDVLSLSLGASPFFRPNLTSDPIGIGAFHAVEHGIIVVCSAGNSGPKQMTVVNDAPWILTVAATTIDRDLQSNVVLGNDKVVKGEAINFSPLSKSADYPLITGESAKTTTADLAEARQCHSSSLDKNKVKGKIVVCDGIDDHQTTFAKIDTVKEVGGLGLVHITDKEGAVANNYVDFPATVVRSKDATTILQYVNSTSNPVATILPTVTVMDYKPAPMVAIFSSRGPSGLSKNILKPDIAAPGVAIVAAWIENNDVEDIPKGKKPSPYNILSGTSMSCPHVSGLAGSIKSRNPTWSASAIKSAIMTSATQINNMKAPITTDLGSVGTPYDYGAGEITTTESFRPGLVYETNTIDYLNYLCYIGLNTTTVKVISKTVSDSFSCPEDSTPDHVSNINYPSIAISNFTSKGTVNVSRTVTNVGEEDETVYSVIIDAPNGVKLQLIPEKLEFTKSSKKQSYQVIFSSTSSSVKEDLFGSITWSNGKYNVRSPFILTV 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05703 765 Gene3D - 339 483 - -
Trre5g05703 765 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Trre5g05703 765 Pfam Subtilase family 139 606 IPR000209 GO:0006508|GO:0008236
Trre5g05703 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 761 IPR045051 -
Trre5g05703 765 ProSiteProfiles Serine proteases, subtilase domain profile. 118 615 - -
Trre5g05703 765 SUPERFAMILY Subtilisin-like 113 611 IPR036852 GO:0004252|GO:0006508
Trre5g05703 765 CDD PA_subtilisin_like 345 476 - -
Trre5g05703 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Trre5g05703 765 FunFam Subtilisin-like protease SBT5.3 28 114 - -
Trre5g05703 765 Gene3D Peptidase S8/S53 domain 141 627 IPR036852 GO:0004252|GO:0006508
Trre5g05703 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Trre5g05703 765 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Trre5g05703 765 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Trre5g05703 765 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Trre5g05703 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Trre5g05703 765 CDD Peptidases_S8_3 111 581 IPR034197 -
Trre5g05703 765 Gene3D - 631 765 - -
Trre5g05703 765 FunFam Subtilisin-like protease SBT1.5 141 349 - -
Trre5g05703 765 FunFam subtilisin-like protease SBT1.5 339 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05703 Trre-Chr5 57095620 57101206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05703 40 764 Subtilisin-like Serine Gene Family AT1G20150 52.145 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05703 K25898 - gmx:100820194 1105.12