Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05701 ATGATGAAGTTTGCTAGTACTAATTCATCAACTAGCTTAATGTTATGTTTCATCTTTTTGTTAGTTTTATCGTATAGAACCAATGCATTGAAACTACCACCAAATGTTACAATTCCAGCACTCATAGCTTTTGGAGATTCCATCATGGATACAGGAAATAACAACAATATCAAAACAATCGTCAAGTGTAATTTCCCTCCTTATGGTCAAGATTTTAAGGGAGGGATTCCAACCGGTCGATTTTGCAACGGAAAAAATCCGTCAGACTTGATAGCTGAAGAGTTTGGTATTAAGGAGCTTTTACCAGCTTATTTGGATCCAAATCTCAAACCAAGTGACCTTCCTACCGGAGTATGCTTTGCTTCTGGTGCTTCCGGATACGATCCTCTAACACCTAAATTAGTGTCGGTGATTTCAATGTCGGAGCAACTAGAGATGTTCAAAGAATACTTAGGAAAGCTTAAAGGTGTGGTTGGAGAGAAGAAGAAAAATTACATCATAGCCAACACTCTTTTTATTGTGGTAGCTGGAAGTGATGACCTTGCCAACACATATTTTACTACTCGCACCCCACAACTACACTACGATGTACCTGCTTATACTGACCTTATGGCCAGCAAAGCCTCTGAATTCGTTAAGGAAATATATTACTTAGGAGCACGCAGAATTGGAGTGTTCAGTGCAGCACCAATTGGTTACTTACCATCACAAAGGACTCTAGGTGGAGGTCTATTTAGAAAGATCAATGAAGAATACAATGAAGCAGCCAAGTTATTCAACTCCAAACTCTCCAAGCAAATGGACTATCTTCAATCTACCTTGCCCAATAGTAGGGTTGTTTATATTGATATTTACAGTCCCCTACTTGATATCATTCTAAAGCCCCAAAAATATGGATATAAAGTTGCGGATAAAGGTTGTTGTGGCACAGGAAAACTAGAGGTTTCAATATTATGCAACCCTTTGACTCCACCTTGTGAAGATAATTCAGAATACATTTTTTGGGATAGTTATCATCCAACTGAAAGTGTATACAGAGTTCTTGTGGGTGAAGTTCTTCCAAAATATATCGGTCGCTTGACATGA 1086 0.384 MMKFASTNSSTSLMLCFIFLLVLSYRTNALKLPPNVTIPALIAFGDSIMDTGNNNNIKTIVKCNFPPYGQDFKGGIPTGRFCNGKNPSDLIAEEFGIKELLPAYLDPNLKPSDLPTGVCFASGASGYDPLTPKLVSVISMSEQLEMFKEYLGKLKGVVGEKKKNYIIANTLFIVVAGSDDLANTYFTTRTPQLHYDVPAYTDLMASKASEFVKEIYYLGARRIGVFSAAPIGYLPSQRTLGGGLFRKINEEYNEAAKLFNSKLSKQMDYLQSTLPNSRVVYIDIYSPLLDIILKPQKYGYKVADKGCCGTGKLEVSILCNPLTPPCEDNSEYIFWDSYHPTESVYRVLVGEVLPKYIGRLT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05701 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Trre5g05701 361 Pfam GDSL-like Lipase/Acylhydrolase 42 347 IPR001087 GO:0016788
Trre5g05701 361 FunFam GDSL esterase/lipase APG 30 357 - -
Trre5g05701 361 CDD SGNH_plant_lipase_like 39 356 IPR035669 -
Trre5g05701 361 PANTHER GDSL ESTERASE/LIPASE EXL3 19 351 - -
Trre5g05701 361 SUPERFAMILY SGNH hydrolase 41 356 - -
Trre5g05701 361 Gene3D SGNH hydrolase 31 355 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05701 Trre-Chr5 57082541 57087666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05701 35 348 Pollen Coat Proteome AT1G75910 39.117 6.76e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05701 - - gmx:100793078 531.946