Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05670 ATGATAGGATCGTTTATTACCAGGATACTTGTAATGGTTTTTGGCTATGCCTACCCAGCTTATGAATGCTATAAAGCAGTTGAGAAGAATAGGCCTGAAATTGAACAACTACGCTTTTGGTGCCAGTATTGGATTTTGGTGGCTCTTTTAACGGTGTTTGAACGAATTGGTGATACATTTATATCATGGGTTCCAATGTATAGTGAAGCTAAATTGGCCTTTTTTATATACCTATGGTACCCGAAAACAAAGGGAACAACATATGTGTATGATTCTTTCTTTAGACCATATGTAGCGAAACACGAGACGGATATTGATCGTAACTTGATGGAACTAAGGACACGGGCAGGAGATATTGCAGTTGTGTATTGGCAAAAAGCTGCTAGTTACGGCCAGACTAGAATTTTTGACATTTTGCAGTATGTTGCTGCTCAATCAACGCCACCGGCTCGCCCTGCTCAGCCACAACCGGGTGCAAGAGGTCGCCAACCTGCATCTGGCAATAATAGCCAACAAGCTCCAGCAACAGCACCACCAGCTGAGGGTCCAACTCCTCCCACTTCTAGCTCATCTTCAAGTCAGCACCAAAAGGAAGTAGCAGAAGAGTTGGGTTCTTCACAAGTACCTAAAGCACCCTACTCTTTAGCAGGTTTAAATTCTCAGAAGAATAATCCTACACAAGAATCTGGCAACCAATCCACACCTGCAGAGGCAGAGCCAATGCAGATTGAAGAAGCACTGCCTTCATCATCTTCTGCAAATGAAAATGAAAACCCTCCTCCGAAAGAAACAATAATGGAAGAACGCATTAATGTTACACGGGCCAGACTAAGAAAAAATAGATCAGTAGGAAATCAGTAG 861 0.4274 MIGSFITRILVMVFGYAYPAYECYKAVEKNRPEIEQLRFWCQYWILVALLTVFERIGDTFISWVPMYSEAKLAFFIYLWYPKTKGTTYVYDSFFRPYVAKHETDIDRNLMELRTRAGDIAVVYWQKAASYGQTRIFDILQYVAAQSTPPARPAQPQPGARGRQPASGNNSQQAPATAPPAEGPTPPTSSSSSSQHQKEVAEELGSSQVPKAPYSLAGLNSQKNNPTQESGNQSTPAEAEPMQIEEALPSSSSANENENPPPKETIMEERINVTRARLRKNRSVGNQ 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05670 286 MobiDBLite consensus disorder prediction 147 286 - -
Trre5g05670 286 MobiDBLite consensus disorder prediction 212 238 - -
Trre5g05670 286 MobiDBLite consensus disorder prediction 186 201 - -
Trre5g05670 286 PANTHER HVA22-LIKE PROTEINS 12 142 IPR004345 -
Trre5g05670 286 MobiDBLite consensus disorder prediction 245 259 - -
Trre5g05670 286 MobiDBLite consensus disorder prediction 161 177 - -
Trre5g05670 286 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
Trre5g05670 286 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05670 Trre-Chr5 56770584 56772231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05670 - K17338 gmx:100797848 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05670 5 56770584 56772231 Trre5g05670 5 56770584 56772231 ECH
Trre1g00085 1 588498 590570 Trre5g05670 5 56770584 56772231 PCT