Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05645 ATGGACAAATCCGTCAAGACTATTCGTGAGCGTAAGTATAAGGTGATAAACAATCAGATTGACACCCAAAGGAAGAAGTTTAATAATGAGAGAGAGGTGCACAACAGACTCCTGCGTGACTTGGATGCAAGAGCAGAAGATCCACGTTATGAAATGATGGACAATGGAGGAGATTATGAGTCTGTGATTGGATTCTCAAATTTAGGTCCGCGCATGTTTGCATTGAGCTTACAGCCTACTCATCCTAACCCCCACAGCCACAATGGAGCACCTCCTGCTGCCTCTGATCTCACTACTTACCCATTACTTTTCTAG 315 0.4413 MDKSVKTIRERKYKVINNQIDTQRKKFNNEREVHNRLLRDLDARAEDPRYEMMDNGGDYESVIGFSNLGPRMFALSLQPTHPNPHSHNGAPPAASDLTTYPLLF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05645 104 MobiDBLite consensus disorder prediction 75 104 - -
Trre5g05645 104 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05645 Trre-Chr5 56560155 56562013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05645 1 103 MADS-box Gene Family AT3G54340 41.346 1.18e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05645 K09264 - lja:Lj1g3v2141080.1 176.022