Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05639 ATGGCTGATAATTCAGGTGGGAGAATGTGGTGCTCTATACCAGAAAGGTTTCAGCTGCATGTGGCCATGTTGGCCCTGCAGTTTGGATATGCTGGTTTCCATGTTGTCTCAAGAGCTGCACTTAACATGGGTGTTAGCAAACTTGTTTTCCCAGTTTACCGCAATATTATTGCTTTTCTTCTACTCCTCCCTTTTGCTTACTTCTTGGAAAAGAAGGAGAGGCCAGCTATTACTTTAAACTTTCTCTTGCAGTTCTTTTGTCTTGCCCTCGTCGGGATTACGGCGAACCAGGGTTTCTACTTGCTTGGGTTGGACAATACATCTCCAACTTTTGCATCAGCAATTCAAAACTCTGTTCCAGCCATTACATTTCTGATGGCAGTCATACTAAGAATAGAACAAGTGAGGTTGAACAGAAAGGATGGAATAGGGAAAGTGGTAGGAACATTGTTCTGTGTTTTAGGGGCATCAGTGATTACACTATATAAAGGTCCAACAATATATAGTCCAGTTCCACCACTACACAATAACAGTGGTAGTAGCAATAACAATAGCATACAAGTATTTGAAGAATCAATCTCAGTTTTGGGAGATGCAAAAGGAAAAAACTGGACACTTGGATGTTTGTACCTAATAGGACATTGTTTGTCTTGGTCTGGTTGGCTGGTGTTGCAAGCACCTGTCCTTAAGAAGTATCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGACTTATTCAATTTCTCATTATTGCTTTGATTGTTGAAAGAGATGCTCAGGCTTGGATTTTCCAATCTGGTGGTGAAGTTTTCACTATTTTGTATGCGGGAGTGGTGGCATCTGGAATTGCATTCGCTGTACAAATATGGTGCATTGACAGAGGAGGTCCTGTTTTTGTTGCGGTGTATCAACCTGTTCAAACCCTTGTTGTTGCTATTATGGCTTCCCTTGCTTTAGGAGAAGAATTCTACTTAGGAGGGATAATTGGAGCAGGATTGATAATTGTGGGGTTGTACCTAGTCTTGTGGGGTAAAAATGAAGAAAAGAAATTTGCAAGGGAGCTGGCAGCAATCACTTCATCCACTCCTGAGAATAGTAATAGCATCATCAGATCCTCAAGCCATCATGCCAAAACATCACTTGCTCAACCACTTCTTCCTTCATCAACGGAAAATGTTTGA 1188 0.4141 MADNSGGRMWCSIPERFQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFCLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGIGKVVGTLFCVLGASVITLYKGPTIYSPVPPLHNNSGSSNNNSIQVFEESISVLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIVERDAQAWIFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAGLIIVGLYLVLWGKNEEKKFARELAAITSSTPENSNSIIRSSSHHAKTSLAQPLLPSSTENV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05639 395 PANTHER WAT1-RELATED PROTEIN 21 361 IPR030184 GO:0016020|GO:0022857
Trre5g05639 395 Pfam EamA-like transporter family 23 160 IPR000620 GO:0016020
Trre5g05639 395 Pfam EamA-like transporter family 206 344 IPR000620 GO:0016020
Trre5g05639 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 349 - -
Trre5g05639 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Trre5g05639 395 MobiDBLite consensus disorder prediction 366 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05639 Trre-Chr5 56487474 56491955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05639 1 395 Nodulin-like Gene Family AT1G75500 73.552 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05639 - - gmx:100786714 626.706