Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05584 ATGCAATATGAGTACGAGAATTATGATCCCTCGTTTCCCGACCAACCTGTGGTTGACCAATACCTCCCACTTTGGGCCAGGTTACCAGCCTTCAAGTCCAAACCAGCCTTTATTTGGGCTGAAGATTACCTAAACACCATTTCCACTACCCACCTCACCTATGAACAACTCAATACCTCAGTAGATATAATCTCAACTCAACTACTCTTTCCACTTCAAAGAGATGATACAGTCCTTATACTTTGCTCTCCAGGACTTGACCTTGTTAAGGTCATTTTTGGTTGTCAAAGAGCTGGTCTTTTAACTGTCCCTATAGTCCCTCCTCACCCTTCTTTCACTAATGAAAAAAATTACCATCACCTTATAAGGATCATTTCACAAACTAAACCAAAAGCTGCAATAGCTCACCCCAATTACATTTCAACTATTCAACAATACATCACTTCCTCCCACAACAAGAACAAACTAGCTCACATGTTACAAACTCTCTTATGGATTTCTACAGAAGATATAAAAAACAATAACATAAATTCAAATACAAATTTATATTCATACAATGGTCGAAAACCGGACGAGGTTTATTTGGTTCAATACACATCCGGTGCAACCGGAATACCAAAACCGGTTCTTGTAACAACAGGTTCGGCAGCACATAACGTTAGAACAGCAAGAAAAGCTTATGATCTTCATCCAAACAGTACTATAGTTTCATGGTTACCTCAATACCATGATTGTGGTCTCATGTTTTTGTTACTCACAATTGTATCCGGTGCAACATGTGTTCTAACTTCCCCGACATCGTTCATCAAACGACCAAGACTCTGGCTTGAGTTAATGTCGAAATTCAATGCTACTTGCACCCCGGTTCCTTCTTTCACACTACCACTTGTAGTTAAACGTGGAGGGATTCACAAAGGAAGTTTTCCCATTAATCTATCAAATCTTAACAACCTTATAATCATCAATGAACCTATTTATAGAGATTCAGTGGTTGAATTTGTTCACACTTTTTCGCCATTCGGGTTAAAAAGTTCCTCTATATCACCTTCTTATGGATTAGCAGAAAATTGTACTTTTGTTTCAACTGCATGGAGATATAAAGAAGAAAATTTTCCAACTCACAATAAACTTTTACCAGTTGCAAAGCTTGAGGAACAAGAAGACATGGACATCATGGTTGTTAATGAAGAAACACTTGAACCTGTTGAAGATGGTGTTGAAGGAGAAATTTGGGTTTCATCACCAAGTAATGCTTCTGGTTATCTTGATCACCCTTCTTTAACAAGAGAAGTTTTTCATGCAAGAATCAGAAACAAAGTTCGTAGGTGTTTTCTTCGAACCGGTGACAAAGGAATAGTAAAAGGAGAAAAAAGGTATCTCTTTGTTACTGGTAGAATTCAAGACACTATAAAGCTTCAAAATGGTGAAAAGATTCATCCACATTACATAGAAACCGCGGTTTTCAACAGTTTTCCTAAGTTACTACGAGGTGGCTGCGTTGCGGCTTTTAAAGTTTTAGCAACAGTTGTAATTGTTGCAGAGATGCAGAGGATTGAAAAAAATGTGGATGAAGATATTCTAAGGAGTGTTTGTGAGGGAATTAAAGAAAGTGTTATGAAAAAAGAGGGTGTTGAAGTTGGATGGATTGTTTTGGTTAAGAGTGAATGTGTTCCAAAAACTACTTCTGGGAAATTGCAAAGATGGGCTGCTAAAGAGAAGCTTCTTGATGGAAAAATGAAAATTTTGATGGAGATGAGATTTGGAAAAGATATTATAAGGATGAAACATGAGGTAATAAGAAAAGTGGATGTTGAAAAAAATGATCATTTAGGTGCAGAAACTCGTAGCTCATTGATCTCACATCTATGA 1869 0.3724 MQYEYENYDPSFPDQPVVDQYLPLWARLPAFKSKPAFIWAEDYLNTISTTHLTYEQLNTSVDIISTQLLFPLQRDDTVLILCSPGLDLVKVIFGCQRAGLLTVPIVPPHPSFTNEKNYHHLIRIISQTKPKAAIAHPNYISTIQQYITSSHNKNKLAHMLQTLLWISTEDIKNNNINSNTNLYSYNGRKPDEVYLVQYTSGATGIPKPVLVTTGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTSFIKRPRLWLELMSKFNATCTPVPSFTLPLVVKRGGIHKGSFPINLSNLNNLIIINEPIYRDSVVEFVHTFSPFGLKSSSISPSYGLAENCTFVSTAWRYKEENFPTHNKLLPVAKLEEQEDMDIMVVNEETLEPVEDGVEGEIWVSSPSNASGYLDHPSLTREVFHARIRNKVRRCFLRTGDKGIVKGEKRYLFVTGRIQDTIKLQNGEKIHPHYIETAVFNSFPKLLRGGCVAAFKVLATVVIVAEMQRIEKNVDEDILRSVCEGIKESVMKKEGVEVGWIVLVKSECVPKTTSGKLQRWAAKEKLLDGKMKILMEMRFGKDIIRMKHEVIRKVDVEKNDHLGAETRSSLISHL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05584 622 Gene3D - 6 466 IPR042099 -
Trre5g05584 622 Gene3D - 468 587 IPR045851 -
Trre5g05584 622 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 585 - -
Trre5g05584 622 Pfam AMP-binding enzyme 31 473 IPR000873 -
Trre5g05584 622 SUPERFAMILY Acetyl-CoA synthetase-like 20 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05584 Trre-Chr5 56163210 56165078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05584 189 574 Monolignol Biosynthesis Gene Families AT4G19010 26.700 2.36e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05584 - - gmx:102666455 918.687