Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05571 ATGTCTAAACGCTTCAAGATGAAATTTACAATCCCTTCTTTTCAAATGTGTCGCTCCGATGACCTTTCCTCTTTTCCGGGAAATCCTGTTCCGGCAATATACCGTCTTTCTCCGGTGAACTCCAAAGCACATGACATAGGCTACCCTGACATCCACAATTCGTCATTGTCGTTGTCACCGGAACAACAATGCAAGGTGTCCTCAAAGACAAACAGAGTAAAATCCAAAGGCCGAAAAAGTACCTCTGATGTTCCAACGAGAAAGAGCGAGTTTCTAATGGATAAAATCAATGAAGAAGAGAGTGAGAGTTTGATTTCTTGCTTGTCAAGATTCTCCGAAGACCATAAGGTATATTCTTCGAGTTCTTCCGGTACTATGGACAGTGAAGTTAGACCCGATTCAAATTCTGATAATAAAAAAGAGAATACAGATTTAATAAGCATGGATAGAAGACCAATATGTAGTGTTAGGAAGATTGAGAGAGTGAGGTTTCAAAGTACTATAGAGAATCAAAGAGGATTAGAAAGGAAGGTTATGTCAAGTAGAATTGAGGAGAAGGTAAAAGAAAGTTTTGCTTTGGTGAAAAGGTCAAAGGATCCTTATGAAGACTTCAAGAAGTCAATGCTAGAGATGATAGAAGAGATGGAAATGTATGAGGCTAAGGACTTGGAACAACTATTGCAGTGTTTTTTGGCTTTGAATTCTAGGGATTATCATGGAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACAAATGTTTGTTTGGAATCCTAAGTCAAATACAAATTTTCAAACTAATGTTCAAACTACGGACGTTGAAAAGTAG 828 0.3804 MSKRFKMKFTIPSFQMCRSDDLSSFPGNPVPAIYRLSPVNSKAHDIGYPDIHNSSLSLSPEQQCKVSSKTNRVKSKGRKSTSDVPTRKSEFLMDKINEEESESLISCLSRFSEDHKVYSSSSSGTMDSEVRPDSNSDNKKENTDLISMDRRPICSVRKIERVRFQSTIENQRGLERKVMSSRIEEKVKESFALVKRSKDPYEDFKKSMLEMIEEMEMYEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSNTNFQTNVQTTDVEK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05571 275 ProSiteProfiles OVATE domain profile. 193 252 IPR006458 -
Trre5g05571 275 MobiDBLite consensus disorder prediction 76 93 - -
Trre5g05571 275 MobiDBLite consensus disorder prediction 118 144 - -
Trre5g05571 275 MobiDBLite consensus disorder prediction 53 93 - -
Trre5g05571 275 Pfam Transcriptional repressor, ovate 197 254 IPR006458 -
Trre5g05571 275 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 75 254 IPR038933 GO:0045892
Trre5g05571 275 Coils Coil 201 221 - -
Trre5g05571 275 NCBIfam uncharacterized plant-specific domain TIGR01568 192 253 IPR006458 -
Trre5g05571 275 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05571 Trre-Chr5 56080084 56080911 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre5g05571 Ovate 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05571 - - gmx:102662518 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05571 5 56080084 56080911 Trre5g05571 5 56080084 56080911 ECH