Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05553 ATGGCTTCAACATCACTTACCTTAATATCTTCTACTTTCTTTCAAAAAGAATTTCCAACAAAAAGAACAACAAAACACCCCATTTGCTGCTCCATTTCCAAATGTCCTTTCACTCCAAATTCAGTTACACCATTGAAAGTCTCGGTGTCCGACAAAGTTACGACACAATCCCCAGCCCTCCTTACTCCTATAACAACTTTAGTGTCAGACACTGACACGACACCATCTTCTGCTCCACAACAACCATCACCCCAACCACTGAAAAACCTTCCAATGCGAAAAATCCCAGGTGATTACGGCCTCCCTTTCATAGGACCCTTCCAAGATCGTCTCGATTATTTTTACAGCGAAGGCGGCCGTGACAAATTTTTCCGAGCTAAAATGAACAAATACAATTCAACCATCTTTCGCGCAAATATGCCACCAGGCCCTTTCATTTCATCAAACCCAAATGTCATTGTTTTACTTGATGGAAAATCCTTCCCTATTCTTTTCGACAACTCCAAAGTCGAAAAACGTGACATATTTACCGGAACTTTCATGCCTTCAACTGAACTCACCGGCGGTTATAGAATTCTCTCTTACCTTGATCCAACCGAACCAAAACACGAACAACTCAAAAGCCTCATCTTCTTCCTCCTCAAAACTCGAAGCAGTCACTTCATCCCTGAGTTTCACTCATCTTACACAAACCTCTTCGATACATTAGAAAAAGAGCTTGCTAAAACAGGAAAAGCAATTTTCTCTGACGCAAACGATCAAGCAGCGTTTAACTACCTTGTAAAAGCATTTTTTGGAACTAACCCTACCGAAACAAATCTTAAAATGGATGCTCCAAAAATAGTATCCAAATGGACTTTGATGCAACTAAGTCCAATTCTTTCATTAGGTCTTTCAAAATATCTTGAAGAACCACTTTTTCACACTTTTCGTCTTCCACCAATTATGGTGAAAAAAGATTATCAGAGACTCTACGATTTTTTCTACGAGTCATCTACTGGACCGGTTTTAGATGAAGCAGTTAGACTCGGAGTTTCTAAAGAAGAAGCAGTTCATAATTTGTTATTCACAACATGTTTTAATTCATTTGGTGGAATGAAGCTTTTTTTCCCAAATTTGTTGAAGTGGATTGGAAGAGGTGGTGTTAATCTACACCGTCGATTAGCGGAAGAGATTCGATCTGTTGTTAAATCAAACAGTGGGAAAGTGTCTATGGCTACAATGGAACAAATGCCGTTGATGAAATCAGTGGTTTATGAAGCACTTAGAATTGAACCACCAGTGCCATTACAATATGGTAAAGCAAAACAAGATTTTGTTATTGAGAATCATGAGAATTCGTTTCAAGTGAAAGAAGGTGAAATGTTGTTCGGGTTTCAACCTTTTGCGACAAAAGATCCTAAGATATTTGATAAAGCTGATGAGTTTGTTGGAGAGAGGTTTATGGGTGAGGGAGAGAAGTTGTTGAAACATGTGTTCTGGTCGAATGGCCGTGAAACGGAAGAGCCAACAGTTGGTAATAAGCAATGTCCTGGTAAGGATTTTGTTGTGTTGTTTTCAAGGCTTTTGGTGGTGGAGTTGTTTCTTCGTTATGATACTTTTGGTATTCAAGTTGGGAAGTCTCCAACAGGATCTGCTGTTACTTTTACCTCTCTCAAGAGAGCAACTTTTTAG 1674 0.3919 MASTSLTLISSTFFQKEFPTKRTTKHPICCSISKCPFTPNSVTPLKVSVSDKVTTQSPALLTPITTLVSDTDTTPSSAPQQPSPQPLKNLPMRKIPGDYGLPFIGPFQDRLDYFYSEGGRDKFFRAKMNKYNSTIFRANMPPGPFISSNPNVIVLLDGKSFPILFDNSKVEKRDIFTGTFMPSTELTGGYRILSYLDPTEPKHEQLKSLIFFLLKTRSSHFIPEFHSSYTNLFDTLEKELAKTGKAIFSDANDQAAFNYLVKAFFGTNPTETNLKMDAPKIVSKWTLMQLSPILSLGLSKYLEEPLFHTFRLPPIMVKKDYQRLYDFFYESSTGPVLDEAVRLGVSKEEAVHNLLFTTCFNSFGGMKLFFPNLLKWIGRGGVNLHRRLAEEIRSVVKSNSGKVSMATMEQMPLMKSVVYEALRIEPPVPLQYGKAKQDFVIENHENSFQVKEGEMLFGFQPFATKDPKIFDKADEFVGERFMGEGEKLLKHVFWSNGRETEEPTVGNKQCPGKDFVVLFSRLLVVELFLRYDTFGIQVGKSPTGSAVTFTSLKRATF 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05553 557 MobiDBLite consensus disorder prediction 68 89 - -
Trre5g05553 557 FunFam Allene oxide synthase, chloroplastic 90 557 - -
Trre5g05553 557 Gene3D Cytochrome P450 87 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05553 557 Pfam Cytochrome P450 385 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05553 557 PANTHER CYTOCHROME P450 26 90 531 - -
Trre5g05553 557 CDD CYP74 125 550 - -
Trre5g05553 557 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05553 557 PRINTS E-class P450 group IV signature 464 482 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05553 557 PRINTS E-class P450 group IV signature 510 528 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05553 557 SUPERFAMILY Cytochrome P450 90 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05553 Trre-Chr5 55948674 55950347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05553 43 557 Cytochrome P450 AT5G42650 60.461 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05553 K01723 - gmx:100807192 756.133