Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05551 ATGATCACAAAACACTCACTTCTAATCCTTTTATTAGCACTAATCTTTTTTCCTATAATAATCAAATGTCAAGTTAATTACCGTGACTGCCACCAAACATGTGGTTCATCAAAACCCTTCCCTTACCCATTCGGATTCTCTTCCGGTTGCGAAATTCGACTAAACTGCACCGTCCACGGCGAAATCTTCATCGGAGAATTTCCAGTTCAATTGGTAAACTCAAATAGTATAATAGTTAAAATCAAATCGCAATGTAATCGTCGATTTGAAACCTTTCATCAACTCTTCAGTCATAAATACGCACCTACTTCGGGAAACGTAATTCTGTTACAAAATTGTACGGAAAATCGATCGCCTTGTATGATACCGGAGACTCTGCTTCCTAGTCAATTCAAATCTGAATCTGACGGTTGCAACAACAACGCCTCTGCCGGTGGCGGCGGAGGGAAATTGAGTTGTTACATTGAAAATAATACGAGAGGGTTCGTGAATGAGACAAAATTGGAGAGGAACAGGTGTAAGTACTTTATATCGTCGATTTCATCGGAAAGATTGAGAAACAGTTTGGATTCGGCGGTTTCTTTGGAAGTAGCTACGATTGAGCTTGGATGGTGGCTTCATGGAGATCAGTGTCTTTGTTCTGATCATGCTAATTGTACTCAAATTAGGTCACCGATTGATGGAAATGCTGGGTTTCGATGTCGATGTAATGAAGGATTCGCCGGCGATGGGTTTTTGGCTGGAAATGGCTGCCGGAAACGGAAAGCCTCATCAACATGCAACCCAGCAAAGTACATGTCCGGAAGATGTGGAGGAAATGCAAGATTCATTGTCTTAATTGGAGGATTTGTTTTTGGTGTATCACTGATGGTTGCTCTGGGTTCAGTATGCTGTTACTTTCGCCGACGCACCAAATTGAGAGTCACAAAGAGTACAAAAAGACGCTTCACTGAAACTACTAACAATTACAGTGTTCCTATCTATCCCTACAAAGACATAGAAAAAGCTACAAATAATTTTTCAGAGAAACAAAGATTGGGAACAGGAGCATATGGTACAGTTTATTCTGGAAAACTTTACAACGATGAATATGTCGCAATCAAAAGAATAAAACACAGAGACAATGAAAGCATTGAGCAAGTCATGAATGAGATCAAACTCATTTCCTCTGTTAGTCACCCCAATTTAGTGCGCTTGTTAGGTTGTTCAATGGAATATGGAGAACAAATCTTAGTGTATGAGTTCATGCCCAATGGAACACTAAATCAGCATTTACAAAGAGAGAAAGGGAACGAACTTTCATGGCCTGTTAGACTCAAAATTGCAACAGAAACAGCACAAGCCATAGCTCATCTTCATTCAGCAATTAATCCACCTATTTACCATAGAGATATCAAATCAAGTAACATACTTTTGGACCAAAATTTTGGATCCAAAGTAGCAGATTTTGGGCTTTCTAGACTAGGAATAACCGAAATATCTCATGTTTCTCATGTTTCAACTGCCCCACAAGGAACACCTGGCTATGTCGACCCACAATACCATCAAGACTTTCACCTTTCTGATAAAAGTGATGTATATAGCTTTGGAGTTGTTCTCGTTGAGATCATAACAGGACTAAAAGTAGTTGATTTTTCTCGTCCTCATAATGAAGTGAATTTGGCTTCTCTTGCTGTTGACAGGATCAGAAAAGGGCTTTTAGAAGATATTATAGACCCAATTGTGTTTCTTGATCCCCAAGTAACCAGTGATGTGTGGACACTTTCTTCCATACACAAGGTAGCTGAGTTGGCATTCAGATGTCTTGCATTTCACAGGGATATGAGACCTTGTATGACAGAAGTGGCAACTGAGTTAGAGCAGCTAAGTTTGAATAAGTGGAACTCTTTCGGAGAAAACAGCTCTATTATAGATCACCTGTCTTCTTGTTCTTCTTCTTCTAGTGAAAGTGAGAAACCATTGAGCAGCAACACCACATTGAAGGATGTTGGGCCTAAGGGTGACCATCTTAAGCTGGAGACTGTGCCTGTTTCTTTTAGGTCAGTTGATAGGCTCAATAGTAGCTCACCCGTTTCGGTGCAAGATCCAGACCCATGGTTTAGTGAGCAAAGCTCTCCTTCGTCAAATAGTTTTCCCAGTAAGTCATTTGATCATGGATCTGTTTCATATGGTCAACAAGCTAGTTTGTAG 2190 0.4014 MITKHSLLILLLALIFFPIIIKCQVNYRDCHQTCGSSKPFPYPFGFSSGCEIRLNCTVHGEIFIGEFPVQLVNSNSIIVKIKSQCNRRFETFHQLFSHKYAPTSGNVILLQNCTENRSPCMIPETLLPSQFKSESDGCNNNASAGGGGGKLSCYIENNTRGFVNETKLERNRCKYFISSISSERLRNSLDSAVSLEVATIELGWWLHGDQCLCSDHANCTQIRSPIDGNAGFRCRCNEGFAGDGFLAGNGCRKRKASSTCNPAKYMSGRCGGNARFIVLIGGFVFGVSLMVALGSVCCYFRRRTKLRVTKSTKRRFTETTNNYSVPIYPYKDIEKATNNFSEKQRLGTGAYGTVYSGKLYNDEYVAIKRIKHRDNESIEQVMNEIKLISSVSHPNLVRLLGCSMEYGEQILVYEFMPNGTLNQHLQREKGNELSWPVRLKIATETAQAIAHLHSAINPPIYHRDIKSSNILLDQNFGSKVADFGLSRLGITEISHVSHVSTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPHNEVNLASLAVDRIRKGLLEDIIDPIVFLDPQVTSDVWTLSSIHKVAELAFRCLAFHRDMRPCMTEVATELEQLSLNKWNSFGENSSIIDHLSSCSSSSSESEKPLSSNTTLKDVGPKGDHLKLETVPVSFRSVDRLNSSSPVSVQDPDPWFSEQSSPSSNSFPSKSFDHGSVSYGQQASL 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05551 729 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Trre5g05551 729 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 662 IPR044652 GO:0004672
Trre5g05551 729 FunFam Wall-associated receptor kinase-like 14 307 415 - -
Trre5g05551 729 SUPERFAMILY Protein kinase-like (PK-like) 315 620 IPR011009 -
Trre5g05551 729 MobiDBLite consensus disorder prediction 646 662 - -
Trre5g05551 729 MobiDBLite consensus disorder prediction 646 667 - -
Trre5g05551 729 ProSiteProfiles Protein kinase domain profile. 340 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05551 729 Gene3D Laminin 212 246 - -
Trre5g05551 729 SMART serkin_6 340 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05551 729 CDD STKc_IRAK 346 622 - -
Trre5g05551 729 MobiDBLite consensus disorder prediction 684 729 - -
Trre5g05551 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Trre5g05551 729 Gene3D Transferase(Phosphotransferase) domain 1 416 641 - -
Trre5g05551 729 FunFam Wall-associated receptor kinase-like 20 416 632 - -
Trre5g05551 729 Pfam Protein kinase domain 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05551 729 Gene3D Phosphorylase Kinase; domain 1 300 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05551 Trre-Chr5 55920875 55924589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05551 4 711 Receptor kinase-like Gene Family AT2G23450 50.279 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre5g05551 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05551 - - tpra:123893607 1281.16