Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05510 ATGGATGCCACCCACAAGATGTTTTGTAACACAGAACCTGTTAACCCTTTAAACTCAATGGGCATGCAAGTGTCTTGTATTCTTGTCGTGTCACACTTCTTCAATGTTGTCCTTAGAACTGTTGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGTTTGGTATTAGGACCAATGTCACATATTCCGTACATAAAAGAAACATTTTTTCCCGCGAATTCGATGAATTACTATGAAGTAGTGAGCTTCTTCTGTCGTATAAATTTCATGTTTTTATTTGGATTAGAAATGAATATTCACTACACATTGCGCAATGTGCGTATGGTGGGTTTGGTAGCATGTGGGGGTACGTTAATGGGTGCAATATTCGGTCTATCCGTCTCTTTTTATTTGTATGAAGAGTTAGATATAAATGCTCCAATGCCTTCTTTTTGTATGGTTATAATGTTAGTGGTAGCATACACAAGTTCTCCGATGGTGATTCGTTTGACAGGAGATTTAAGGTTTGCCGCATCCGATGTTGGTCGAATCGCGGTATCGGCCGCGTTGATTACAGAAATGGGTTGCTTATTGTTTTTTAATGTGATGGTTAATTGGACTAGACCATACCATAATTCAACTGGTATGGGATGTCTCATTATTACAACTCTTGTGATTTTTACTAATAGATATTTAGCTATTTGGTTAAATGCAAGACATAGAAATCAAAAGTACCTAAGAGCTCCTGAGTTATTACTCATTCTCTTTTTGCTTCTAACAACCTCAATGGTTATAGAAATTTGGGGTTACAATAGTATTATTCATTGTTTTTTTGTGGGATTGTTATTTCCTAAAGAAGGAAAAACAGCTAGAACATTGCTTCATAAACTTGGTTATTCAATTTATAATTTTGTACTTCCTGTATATTTTGGGTACATGGGTTTACAATGTGATCTTGTAAATGTATTTAAGAGTTTGGATAAGGTAACAAATACAGCCATATTGATTTTGTTGAGCATTGGAAGCAAACTTGGTGGAACTCTTTTAGTTTGTCGTTACCTTCATATTCCTACAAGTGAAGGAATTTTTCTTGGATTTATATTGAACACTAGAGGTTATGCTGACCTTCTTTTTGTGGCAGCTGCAGCAAAACAAAATCTTGACACAGAAGCTTACAATGTGTTGCTAGTAGCAATAGTGATAAACACGATAATATCGGGAATTATTGTGGCTTTTCTCGCGAGGGGGGAAGAGAAAATGTTTTCGAATATTCATACTGCAATTGAACCACAAGAGATAGACGACGAGCTTCGAATTTTGGCTTGTGTATATGATCCTCGACAGGTATCGGCGATACTTGCAACAGTACTAGCAATACATGGATCTAAAGTATCACCTTCTACCACTTATTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAATCCAATTTATTGTTCCATGAAAAAGACAATGCTGACCTTAGTGATGATGATGACTATGGTGGAAATGATGTGGTTGAAATTAATAATTCCTTAGACGCGTTCACCGCAGACACAAAGATTTTGGTTCATCAAAGACGTGCAGTATCGTCTTTTCCAAGTTTGTATGAAGATGTTTGCAACGAAGCTGAAGATCTTCAAGTATCAATTATCCTTCTTCCTTTTCACAAGCATCAACGAATTGATGGAAAACTCGAAAGCGGCAAAGAAGGTATAAGGATTACCAATCAAAAGGTTCTTAGGCACGCCCCTTGTTCTATCGGTGTGATCATAGAAAGAGGACTTGCTAAGGTCCCCGGTTTCTCACAATTGATTGCATCCGAAAATACGCAAAATGTTGCAACACTTTTCTTTGGAGGTCCAGACGATCGCGAGGCTATAGCTTGGAGCCTACGTATTTCAAAATGTTCCCGCATTAACCTAACAATCATTCGATTTTTGTTGTCTTCTTCTTCATCATCACATACCGAACATATTGAAAGTGGAATAAACGCGGATGAAAAAGAAATTTTAATGTCATTATCCGGTGAAGAGACCGTGAACGAGATCGACAATACATTTATGGTCGATTTCTATAACAGATATGTGACTTCAGGACAAATTGGATATGTGGAAAAGTTTGTGGAGGATGGAACACAAACAGTTGAATCTTTGAAAGAGATTGGGGACATGTACTCTTTGTTTATAGTAGGAAGAGGTGGTAGAGGGAATAGTTCATTAACAATAGGTATGAGTGACTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTATTGGCTTCTTCAGATTTTGATATTCATGGTTCTGTTTTGGTCATTCAACAACATAGAGATGCCAAGAAAGGCATAATTCATGATTAA 2346 0.3734 MDATHKMFCNTEPVNPLNSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHIPYIKETFFPANSMNYYEVVSFFCRINFMFLFGLEMNIHYTLRNVRMVGLVACGGTLMGAIFGLSVSFYLYEELDINAPMPSFCMVIMLVVAYTSSPMVIRLTGDLRFAASDVGRIAVSAALITEMGCLLFFNVMVNWTRPYHNSTGMGCLIITTLVIFTNRYLAIWLNARHRNQKYLRAPELLLILFLLLTTSMVIEIWGYNSIIHCFFVGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYMGLQCDLVNVFKSLDKVTNTAILILLSIGSKLGGTLLVCRYLHIPTSEGIFLGFILNTRGYADLLFVAAAAKQNLDTEAYNVLLVAIVINTIISGIIVAFLARGEEKMFSNIHTAIEPQEIDDELRILACVYDPRQVSAILATVLAIHGSKVSPSTTYLMHLIELVKKIKSNLLFHEKDNADLSDDDDYGGNDVVEINNSLDAFTADTKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSIGVIIERGLAKVPGFSQLIASENTQNVATLFFGGPDDREAIAWSLRISKCSRINLTIIRFLLSSSSSSHTEHIESGINADEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVEDGTQTVESLKEIGDMYSLFIVGRGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGIIHD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05510 781 Pfam Sodium/hydrogen exchanger family 27 407 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g05510 781 Gene3D - 19 414 IPR038770 -
Trre5g05510 781 PANTHER CATION/H + ANTIPORTER 15 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05510 Trre-Chr5 55569361 55572087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05510 12 781 Antiporter Super Family AT1G79400 39.024 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05510 K26731 - gmx:100804522 1277.69