Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05429 ATGATCTCATCCTTAATGTTACCATCTGCTGCTACAACATTAAGAAGACCATGTTGTAGTTGTAGCATCACTCCATCATCATCATCTTCACGAAGACTTGCTCTCTTTCATCTTCTCACTACCGGTGGTATTGGATCGCAATTGTTCCGAATACCAGAAGCTAATGCTGCCGAAAAGCTTGACCAAAACTTGTTTGATTGGGTCCAAAATGACAACAGAAGATTTCTACATGTTGTTTACAGTGTTGGAGATTTGGACAAGACTATAAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTGAGAAAACGCGATATACCAGAAGACAAATATTCAAATGCATTTCTTGGATATGGGCCTGAAGAGTCCTACTTTACAGTTGAACTTACTTATAATTATGGAGTGGATAAATATAACATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCCGAAGATGTTGCAAAGACAGTGGATATTGTAAAAGCAAAAGGGGGAAAGGTTACCAGGGAACCGAGTCTTGTCAAAGGTGGCTCTGTAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTAGAGAGAAAACCTACACGCGAACCCTTATCCCAAGTGAATCTTCAAGTAAGCGATCTTGATGGTGTCGTAGCCTTCTATCAGAAAGCTGCAGGCATGAAACTTCTCCGTAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCCGTGTTGGGTTATGGTCCTGAAGCTAATGGTCCTGTTCTAGAACTGAGATACAACTACGGTGTCACTAATTATGATAAAGGAAATGGCTATACACAGATTGCAATAGGCACGAACGATGTCTATAAGACTGCAGAAGCAATCAAATTAAGTGGAGGGAAGATTATCCGTGAACCTGGACCCTTACCGGTTATCAACACCAAGATCGTTGTTTGTTTGGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTCAAGGAATTAGAGTGA 1011 0.4055 MISSLMLPSAATTLRRPCCSCSITPSSSSSRRLALFHLLTTGGIGSQLFRIPEANAAEKLDQNLFDWVQNDNRRFLHVVYSVGDLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEESYFTVELTYNYGVDKYNIGTGFGHFGIVAEDVAKTVDIVKAKGGKVTREPSLVKGGSVVTASVEDPSGYRFELLERKPTREPLSQVNLQVSDLDGVVAFYQKAAGMKLLRKIDNPEEKYTVAVLGYGPEANGPVLELRYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPVINTKIVVCLDPDGWKLVFVDNVDFLKELE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05429 336 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 74 198 IPR037523 -
Trre5g05429 336 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 207 324 IPR004360 -
Trre5g05429 336 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 75 195 IPR004360 -
Trre5g05429 336 ProSitePatterns Glyoxalase I signature 1. 77 98 IPR018146 GO:0004462|GO:0046872
Trre5g05429 336 NCBIfam lactoylglutathione lyase 75 200 IPR004361 GO:0004462|GO:0046872
Trre5g05429 336 Gene3D - 46 200 IPR029068 -
Trre5g05429 336 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 204 328 IPR037523 -
Trre5g05429 336 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 205 328 IPR029068 -
Trre5g05429 336 Gene3D - 201 336 IPR029068 -
Trre5g05429 336 PANTHER LACTOYLGLUTATHIONE LYASE 59 336 - -
Trre5g05429 336 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 73 200 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05429 Trre-Chr5 54958688 54960800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05429 205 327 Calmodulin-binding Proteins AT1G08110 24.324 7.18e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05429 K01759 - gmx:100810908 502.671