Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre5g05429 | ATGATCTCATCCTTAATGTTACCATCTGCTGCTACAACATTAAGAAGACCATGTTGTAGTTGTAGCATCACTCCATCATCATCATCTTCACGAAGACTTGCTCTCTTTCATCTTCTCACTACCGGTGGTATTGGATCGCAATTGTTCCGAATACCAGAAGCTAATGCTGCCGAAAAGCTTGACCAAAACTTGTTTGATTGGGTCCAAAATGACAACAGAAGATTTCTACATGTTGTTTACAGTGTTGGAGATTTGGACAAGACTATAAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTGAGAAAACGCGATATACCAGAAGACAAATATTCAAATGCATTTCTTGGATATGGGCCTGAAGAGTCCTACTTTACAGTTGAACTTACTTATAATTATGGAGTGGATAAATATAACATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCCGAAGATGTTGCAAAGACAGTGGATATTGTAAAAGCAAAAGGGGGAAAGGTTACCAGGGAACCGAGTCTTGTCAAAGGTGGCTCTGTAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTAGAGAGAAAACCTACACGCGAACCCTTATCCCAAGTGAATCTTCAAGTAAGCGATCTTGATGGTGTCGTAGCCTTCTATCAGAAAGCTGCAGGCATGAAACTTCTCCGTAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCCGTGTTGGGTTATGGTCCTGAAGCTAATGGTCCTGTTCTAGAACTGAGATACAACTACGGTGTCACTAATTATGATAAAGGAAATGGCTATACACAGATTGCAATAGGCACGAACGATGTCTATAAGACTGCAGAAGCAATCAAATTAAGTGGAGGGAAGATTATCCGTGAACCTGGACCCTTACCGGTTATCAACACCAAGATCGTTGTTTGTTTGGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTCAAGGAATTAGAGTGA | 1011 | 0.4055 | MISSLMLPSAATTLRRPCCSCSITPSSSSSRRLALFHLLTTGGIGSQLFRIPEANAAEKLDQNLFDWVQNDNRRFLHVVYSVGDLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEESYFTVELTYNYGVDKYNIGTGFGHFGIVAEDVAKTVDIVKAKGGKVTREPSLVKGGSVVTASVEDPSGYRFELLERKPTREPLSQVNLQVSDLDGVVAFYQKAAGMKLLRKIDNPEEKYTVAVLGYGPEANGPVLELRYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPVINTKIVVCLDPDGWKLVFVDNVDFLKELE | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre5g05429 | 336 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 74 | 198 | IPR037523 | - | |
Trre5g05429 | 336 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 207 | 324 | IPR004360 | - | |
Trre5g05429 | 336 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 75 | 195 | IPR004360 | - | |
Trre5g05429 | 336 | ProSitePatterns | Glyoxalase I signature 1. | 77 | 98 | IPR018146 | GO:0004462|GO:0046872 | |
Trre5g05429 | 336 | NCBIfam | lactoylglutathione lyase | 75 | 200 | IPR004361 | GO:0004462|GO:0046872 | |
Trre5g05429 | 336 | Gene3D | - | 46 | 200 | IPR029068 | - | |
Trre5g05429 | 336 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 204 | 328 | IPR037523 | - | |
Trre5g05429 | 336 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 205 | 328 | IPR029068 | - | |
Trre5g05429 | 336 | Gene3D | - | 201 | 336 | IPR029068 | - | |
Trre5g05429 | 336 | PANTHER | LACTOYLGLUTATHIONE LYASE | 59 | 336 | - | - | |
Trre5g05429 | 336 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 73 | 200 | IPR029068 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre5g05429 | Trre-Chr5 | 54958688 | 54960800 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre5g05429 | 205 | 327 | Calmodulin-binding Proteins | AT1G08110 | 24.324 | 7.18e-08 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre5g05429 | K01759 | - | gmx:100810908 | 502.671 |