Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05418 ATGAAAAGCCATCAACCAAAACAACAGCTTAAAACTCAATTATTCTCATGTGGCTTCTTTCGACAATGTGGCCAAACAGTCCTTAGTCCAACTGCCACCGCTCCCACTCCACCACCACTCACTCTCACTCACACCTTAGCAACAACATGTGAATCTTCCACCTCTTCTTCTTCTAATTCCGCTACCACTTCTCAAAGTTTCACTCAGTGGCGTTTCTCTATTCCCACCCCCACTTCTACTCCAAACACCCCTCCTCCACCATCACCACCACCACCACCGCCTCCTCCTCCTCTTCCTTTCCTTTCCACTATTACAAATCTCCAAGAACTCTTCCACGTGTCAGACCTACAATTAACCACAGACCTTAACGCTGCACTTCATCTTCTAGAACGTTCTCTCGTTCCTAATCCACCGCAAGAACAACCACCGTGTCCTCCTAATCTTATGCGCGCACTCATCCGTAATTTACGCGAATCCAAACCCGCTACCAAGATTCTCTTCGCGCTTTGTCTCTCAGAAGCCAACCGTCGTGTCGCGGTTGAAGCCGGCGCCGTTGGCGCCGTCGTGGAATCTGCTCCGGAGTTAGACGGTCCTCCTGCTGAGAGAGCTCTCGCTGCGTTAGAGCTTATGTGTACGGTGCCGGAAGGTGCGGAGGAGGTTAGAGCTCACGCGCTGGCGGTTCCGGTGATGGTTACTGTGATGGGGAAAACGGGAGCGCGTGGGAAGGAGTATGCTATTGGTGTGCTGGCTGTGATTTATGGCGGTGATGCGGCGGATCAACAGACGGCTCCACCGGAAGAGGTGGCGCGTGCGGTGGAGTTGGCTCTTCAAGGAGAGTGTAGTGCTAGGGGAAAAAGAAAAGGGGCCCAGCTTTTGAAGACGTTGCAAAATCTGTCTAACCCCCACTCTCATGAGACAAGTTGA 924 0.5216 MKSHQPKQQLKTQLFSCGFFRQCGQTVLSPTATAPTPPPLTLTHTLATTCESSTSSSSNSATTSQSFTQWRFSIPTPTSTPNTPPPPSPPPPPPPPPLPFLSTITNLQELFHVSDLQLTTDLNAALHLLERSLVPNPPQEQPPCPPNLMRALIRNLRESKPATKILFALCLSEANRRVAVEAGAVGAVVESAPELDGPPAERALAALELMCTVPEGAEEVRAHALAVPVMVTVMGKTGARGKEYAIGVLAVIYGGDAADQQTAPPEEVARAVELALQGECSARGKRKGAQLLKTLQNLSNPHSHETS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05418 307 SUPERFAMILY ARM repeat 124 258 IPR016024 -
Trre5g05418 307 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 304 - -
Trre5g05418 307 MobiDBLite consensus disorder prediction 72 100 - -
Trre5g05418 307 Gene3D - 104 306 IPR011989 -
Trre5g05418 307 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05418 Trre-Chr5 54886665 54887588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05418 147 297 U-box Gene Family AT1G49780 34.868 1.31e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05418 - - gmx:100814020 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05418 5 54886665 54887588 Trre5g05418 5 54886665 54887588 ECH